miRBase entry: ptr-let-7g

Stem-loop ptr-let-7g


Accession
MI0008406
Description
Pan troglodytes ptr-let-7g precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
4 open access papers mention ptr-let-7g
(9 sentences)

Sequence

aggcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaacuguacaggccacugccuugcc
.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).)))))))))))

Structure
a   U        A            ugagg    -a  a    a 
 ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
 ||| |||||||| ||||||||||||     ||||  || ||||  
 ccg uuccguca cggacaugucaa     uaga  ac augg c
-   -        c            -----    gg  -    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 53382136-53382218 [-]

Database links

Mature ptr-let-7g

Accession MIMAT0007942
Description Pan troglodytes ptr-let-7g mature miRNA
Sequence 5 - UGAGGUAGUAGUUUGUACAGUU - 26
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70