Stem-loop ptr-mir-410

Accession

MI0008658

Description

Pan troglodytes ptr-mir-410 precursor miRNA

Literature search

2 open access papers mention ptr-mir-410
(3 sentences)

Sequence

1448 reads, 15.0 reads per million, 18 experiments

guaccugagaagagguugucugugaugaguucgcuuuuauuaaugacgAAUAUAACACAGAUGGCCUGUuuucaguacc
((((.((((((.((((((((((((.((.((((((..........).))))).)).)))))))))))).)))))))))).

Structure

-    c      g            a  a     - uuuu 
 guac ugagaa agguugucugug ug guucg c    a
 |||| |||||| |||||||||||| || ||||| |     
 caug acuuuU UCCGGUAGACAC AU UAAgc g    u
c    -      G            A  A     a uaau 

Annotation confidence Not enough data

Genome context

chr14: 86314162-86314240 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from ptr-mir-410

Mature ptr-miR-410-3p

• Accession: MIMAT0008137
• Description: Pan troglodytes ptr-miR-410-3p mature miRNA
• Sequence: 49 - AAUAUAACACAGAUGGCCUGU - 69
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70