miRBase entry: ptr-mir-410

Stem-loop ptr-mir-410


Accession
MI0008658
Description
Pan troglodytes ptr-mir-410 precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

guaccugagaagagguugucugugaugaguucgcuuuuauuaaugacgAAUAUAACACAGAUGGCCUGUuuucaguacc
((((.((((((.((((((((((((.((.((((((..........).))))).)).)))))))))))).)))))))))).

Structure
-    c      g            a  a     - uuuu 
 guac ugagaa agguugucugug ug guucg c    a
 |||| |||||| |||||||||||| || ||||| |     
 caug acuuuU UCCGGUAGACAC AU UAAgc g    u
c    -      G            A  A     a uaau 


Annotation confidence Not enough data
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Genome context
chr14: 86314162-86314240 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from ptr-mir-410
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-410

Accession MIMAT0008137
Description Pan troglodytes ptr-miR-410 mature miRNA
Sequence 49 - AAUAUAACACAGAUGGCCUGU - 69
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70