Stem-loop tca-mir-31

Accession

MI0008904

Description

Tribolium castaneum tca-mir-31 precursor miRNA

Gene family

MIPF0000064; mir-31

Literature search

1 open access papers mention tca-mir-31
(1 sentences)

Sequence

gaggcagagcAGGCAAGAUGUCGGCAUAGCUgaagguguuugaaacGGCUAUGUCUCAUCCGGCCAACuuaagccuu
(((((.(((..(((..((((..((((((((((.............)))))))))).))))..)))..)))..)))))

Structure

     -a   cA   AA    UC          aaggu 
gaggc  gag  GGC  GAUG  GGCAUAGCUg     g
|||||  |||  |||  ||||  ||||||||||     u
uuccg  uuC  CCG  CUAC  CUGUAUCGGc     u
     aa   AA   GC    -U          aaagu 

Annotation confidence Not enough data

Genome context

ChLG7: 5322477-5322553 [+]

Mature tca-miR-31-5p

• Accession: MIMAT0008362
• Description: Tribolium castaneum tca-miR-31-5p mature miRNA
• Sequence: 11 - AGGCAAGAUGUCGGCAUAGCU - 31
• Evidence: experimental ; SOLID [2]

Mature tca-miR-31-3p

• Accession: MIMAT0019106
• Description: Tribolium castaneum tca-miR-31-3p mature miRNA
• Sequence: 47 - GGCUAUGUCUCAUCCGGCCAAC - 68
• Evidence: experimental ; SOLID [2]

References

1. PubMed ID: 18651924
   In silico prediction and characterization of microRNAs from red flour beetle (Tribolium castaneum)
   "Singh J, Nagaraju J"
   "Insect Mol Biol (2008) 17:427-436


2. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696