Stem-loop sequence dpe-let-7-1

AccessionMI0009254 (change log)
DescriptionDrosophila persimilis let-7-1 stem-loop
Gene family MIPF0000002; let-7
Stem-loop
     u      uu   g     g           guacu 
5' uc ggcaaa  gag uagua guuguauagua     u
   || ||||||  ||| ||||| |||||||||||     c
3' ag ucguuu  uuc aucgu uaacauaucau     a
     u      cu   g     g           gcuag 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (dper_r1.3_FB2010_02) Overlapping transcripts
scaffold_1: 5116234-5116310 [+]
intergenic
Clustered miRNAs
< 10kb from dpe-let-7-1
dpe-mir-100-1scaffold_1: 5115324-5115405 [+]
dpe-let-7-1scaffold_1: 5116234-5116310 [+]
dpe-mir-125-1scaffold_1: 5116595-5116704 [+]
dpe-mir-125-2scaffold_1: 5117116-5117225 [+]
Database links

Mature sequence dpe-let-7

Accession MIMAT0008699
Sequence

11 - 

ugagguaguagguuguauagu

 - 31

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Evidence by similarity; MI0000416

References

1
PMID:17994087 "Evolution of genes and genomes on the Drosophila phylogeny" Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie Nature. 450:203-218(2007).