Stem-loop spu-mir-2009

Accession

MI0010279

Description

Strongylocentrotus purpuratus spu-mir-2009 precursor miRNA

Literature search

1 open access papers mention spu-mir-2009
(1 sentences)

Sequence

uucaaauccucaguaaucuuugguuuuuguggaacagcuccugugaauuauauaagaccaUGAGUUGUCCCACAAAGAACACAgaucgcugugaaucauc
........(.((((.((((.((.(((((((((.(((((((.((.(..((....))..))).))))))).))))))))).)).)))).)))).).......

Structure

uucaaauc u    a    u  g         a       c  u aa  a 
        c cagu aucu ug uuuuugugg acagcuc ug g  uu u
        | |||| |||| || ||||||||| ||||||| || |  ||  
        g gucg uagA AC AGAAACACC UGUUGAG ac c  aa a
-cuacuaa u    c    C  A         C       U  - ag  u 

Annotation confidence Not enough data

Genome context

KN914818.1: 42674-42773 [-]

Mature spu-miR-2009

• Accession: MIMAT0009750
• Description: Strongylocentrotus purpuratus spu-miR-2009 mature miRNA
• Sequence: 61 - UGAGUUGUCCCACAAAGAACACA - 83
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68