Stem-loop sme-mir-753d

Accession

MI0010940

Description

Schmidtea mediterranea sme-mir-753d precursor miRNA

Gene family

MIPF0000752; mir-753

Sequence

uCAGGGCUUGGAUUGUGAUCUCguauauuuaugAGAUCAUUAUUCAAGCUCUCUaaau
..(((((((((((.(((((((((((....))))))))))).)))))))))))......

Structure

----uC           U           u 
      AGGGCUUGGAU GUGAUCUCgua a
      ||||||||||| |||||||||||  
      UCUCGAACUUA UACUAGAguau u
uaaaUC           U           u 

Annotation confidence Not enough data

Comments

This sequence was named mir-753b-2 in [1]. The mature sequence differs from mir-753b, so the entry is renamed here.

Genome context

Contig12996: 14529-14586 [-]

Mature sme-miR-753d-5p

• Accession: MIMAT0011404
• Description: Schmidtea mediterranea sme-miR-753d-5p mature miRNA
• Sequence: 2 - CAGGGCUUGGAUUGUGAUCUC - 22
• Evidence: experimental ; Illumina [1]

Mature sme-miR-753d-3p

• Accession: MIMAT0011405
• Description: Schmidtea mediterranea sme-miR-753d-3p mature miRNA
• Sequence: 34 - AGAUCAUUAUUCAAGCUCUCU - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19553344
   Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea
   "Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR"
   "RNA (2009) 15:1483-1491