Stem-loop sequence sme-mir-753d

Accession

MI0010940 (change log)

Description

Schmidtea mediterranea miR-753d stem-loop

Gene family

MIPF0000752; mir-753

Stem-loop

   ----uc           u           u 
5'       agggcuuggau gugaucucgua a
         ||||||||||| |||||||||||  
3'       ucucgaacuua uacuagaguau u
   uaaauc           u           u 

Confidence

Annotation confidence: not enough data

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Comments

This sequence was named mir-753b-2 in [1]. The mature sequence differs from mir-753b, so the entry is renamed here.

Genome context

• Coordinates (WUSTL3.1): Contig12996: 14529-14586 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0010940

Mature sequence sme-miR-753d-5p

• Accession: MIMAT0011404
• Sequence: 2 - cagggcuuggauugugaucuc - 22
• Evidence: experimental; Illumina [1]

Mature sequence sme-miR-753d-3p

• Accession: MIMAT0011405
• Sequence: 34 - agaucauuauucaagcucucu - 54
• Evidence: experimental; Illumina [1]

References

1. PMID:19553344 "Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea" Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR RNA. 15:1483-1491(2009).