miRBase entry: bta-mir-2483

Stem-loop bta-mir-2483


Accession
MI0011545
Description
Bos taurus bta-mir-2483 precursor miRNA
Gene family
MIPF0001532; mir-2483

Literature search
3 open access papers mention bta-mir-2483
(8 sentences)

Sequence

471 reads, 23 reads per million, 64 experiments
gagugaaaaguucCGUCAACCAUCCAGCUGUUUGAggugaugcaaacAAACAUCUGGUUGGUUGAGAGAauuuuuuacuu
(((((((((((((..(((((((.((((.((((((.(......)...)))))).)))).)))))))..)))))))))))))

Structure
             CG       U    C      --A gu 
gagugaaaaguuc  UCAACCA CCAG UGUUUG   g  g
|||||||||||||  ||||||| |||| ||||||   |   
uucauuuuuuaAG  AGUUGGU GGUC ACAAAc   c  a
             AG       U    U      aaa gu 


Annotation confidence High
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Genome context
chrX: 9234274-9234353 [-]

Database links

Mature bta-miR-2483-5p

Accession MIMAT0012075
Description Bos taurus bta-miR-2483-5p mature miRNA
Sequence 14 - CGUCAACCAUCCAGCUGUUUGA - 35
Evidence experimental
Illumina [1-2]

Mature bta-miR-2483-3p

Accession MIMAT0012076
Description Bos taurus bta-miR-2483-3p mature miRNA
Sequence 48 - AAACAUCUGGUUGGUUGAGAGA - 69
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349

  2. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026