Comments or questions? Email
mirbase@manchester.ac.uk
Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle |
|
|---|---|
| PubMed ID | 21912509 |
| Authors | "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J" |
| Journal | "Int J Biol Sci |
| Volume | 7 |
| Pages | 1016-1026 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| bta-mir-200b | MI0005055 | 309 | chr16 | 52695246 | 52695304 | - | High |
| bta-mir-1839 | MI0010473 | 210 | chr14 | 1928039 | 1928110 | - | - |
| bta-mir-2299 | MI0011309 | 24 | chr12 | 29753514 | 29753592 | - | High |
| bta-mir-2300b | MI0011311 | 10 | chr12 | 31918146 | 31918219 | + | - |
| bta-mir-2308 | MI0011321 | 9 | chr14 | 1612166 | 1612234 | + | - |
| bta-mir-2284t | MI0011331 | 10 | chr15 | 39355496 | 39355568 | - | High |
| bta-mir-2285b-1 | MI0011332 | 18 | chr15 | 39785119 | 39785190 | - | - |
| bta-mir-1343 | MI0011338 | 32 | chr15 | 66591432 | 66591509 | + | - |
| bta-mir-2336 | MI0011362 | 29 | chr19 | 22956198 | 22956273 | + | - |
| bta-mir-199c | MI0011364 | 158 | chr19 | 26881087 | 26881162 | + | - |
| bta-mir-2366 | MI0011397 | 1 | chr21 | 56064696 | 56064764 | + | - |
| bta-mir-2411 | MI0011456 | 163 | chr3 | 16484204 | 16484280 | - | - |
| bta-mir-2419 | MI0011467 | 86 | chr4 | 66580841 | 66580916 | - | - |
| bta-mir-2422 | MI0011470 | 39 | chr4 | 93932865 | 93932932 | + | - |
| bta-mir-2425 | MI0011475 | 7 | chr5 | 30303905 | 30303985 | + | - |
| bta-mir-2448 | MI0011502 | 16 | chr6 | 116014595 | 116014667 | - | High |
| bta-mir-2468 | MI0011528 | 12 | chr8 | 5727335 | 5727407 | + | - |
| bta-mir-2483 | MI0011545 | 23 | chrX | 9234274 | 9234353 | - | High |
| bta-mir-1388 | MI0012206 | 137 | chr13 | 54595416 | 54595507 | + | High |
| bta-mir-1468 | MI0012207 | 580 | chrX | 102956334 | 102956430 | + | - |
| bta-mir-424 | MI0012212 | 90 | chrX | 18288411 | 18288506 | - | High |
| bta-mir-542 | MI0012214 | 92 | chrX | 18283105 | 18283201 | - | High |
| bta-mir-2284w | MI0014497 | 72 | chrX | 2676325 | 2676420 | + | High |
| bta-mir-3431 | MI0014498 | 105 | chrX | 34879430 | 34879526 | - | High |
| bta-mir-2284x | MI0014499 | 3263 | chr1 | 3605102 | 3605197 | - | - |
| bta-mir-3432a-2 | MI0014501 | 118 | chr25 | 34580890 | 34580986 | - | High |
| bta-mir-1277 | MI0021114 | 32 | chrX | 2445343 | 2445420 | + | High |
| bta-mir-149 | MI0021115 | 39 | chr3 | 120921662 | 120921751 | + | High |
| bta-mir-3613a | MI0021118 | 11 | chr12 | 19607296 | 19607381 | - | High |
| bta-mir-2284y-1 | MI0021125 | 296 | chr11 | 73372788 | 73372911 | + | - |
| bta-mir-2285k-1 | MI0021135 | 60 | chr29 | 10896396 | 10896465 | + | - |
| bta-mir-6119 | MI0021137 | 667 | chrX | 4014633 | 4014709 | - | High |
| bta-mir-6120 | MI0021138 | 54 | chr7 | 46077154 | 46077224 | + | - |
| bta-mir-6123 | MI0021141 | 21 | chr13 | 58332856 | 58332937 | + | - |
| bta-mir-6517 | MI0022268 | 67 | chr10 | 42866714 | 42866791 | + | - |
| bta-mir-3154 | MI0022269 | 2 | chr11 | 99127964 | 99128048 | - | - |
| bta-mir-2285o-1 | MI0022270 | 6 | chr12 | 16589906 | 16589987 | - | - |
| bta-mir-2285o-2 | MI0022271 | 13 | chr12 | 32383926 | 32384007 | - | - |
| bta-mir-2285n-1 | MI0022272 | 5 | chr12 | 80695473 | 80695554 | - | - |
| bta-mir-2285n-2 | MI0022273 | 1 | chr13 | 8672979 | 8673059 | + | - |
| bta-mir-2285p | MI0022274 | 15 | chr13 | 36776800 | 36776880 | + | High |
| bta-mir-2285m-1 | MI0022275 | 5 | chr13 | 1405150 | 1405232 | - | - |
| bta-mir-2285m-2 | MI0022276 | 5 | chr13 | 47283643 | 47283723 | - | - |
| bta-mir-2284y-2 | MI0022277 | 297 | chr13 | 73356056 | 73356133 | - | - |
| bta-mir-378b | MI0022279 | 286 | chr15 | 30904740 | 30904837 | + | - |
| bta-mir-6518 | MI0022280 | 5 | chr15 | 43107056 | 43107143 | + | - |
| bta-mir-6519 | MI0022281 | 0 | chr15 | 85091650 | 85091742 | - | - |
| bta-mir-6520 | MI0022282 | 10 | chr17 | 46216414 | 46216497 | - | - |
| bta-mir-6521 | MI0022283 | 6 | chr17 | 67144520 | 67144607 | - | - |
| bta-mir-2285n-3 | MI0022284 | 1 | chr18 | 25205165 | 25205240 | + | - |
| bta-mir-2285n-4 | MI0022285 | 2 | chr18 | 26790400 | 26790485 | - | - |
| bta-mir-2284y-3 | MI0022286 | 295 | chr1 | 83398242 | 83398317 | - | - |
| bta-mir-6522 | MI0022287 | 43 | chr21 | 44010732 | 44010805 | + | - |
| bta-mir-411b | MI0022288 | 2 | chr21 | 67843330 | 67843404 | + | - |
| bta-mir-154c | MI0022289 | 79 | chr21 | 67853625 | 67853699 | + | High |
| bta-mir-376e | MI0022290 | 15 | chr21 | 67856314 | 67856395 | + | High |
| bta-mir-3956 | MI0022291 | 16 | chr21 | 67860482 | 67860579 | + | High |
| bta-mir-411c | MI0022292 | 64 | chr21 | 67867851 | 67867924 | + | High |
| bta-mir-154b | MI0022293 | 20 | chr21 | 67876730 | 67876810 | + | High |
| bta-mir-3957 | MI0022294 | 13 | chr21 | 67881103 | 67881179 | + | - |
| bta-mir-1247 | MI0022295 | 10 | chr21 | 68426259 | 68426336 | - | - |
| bta-mir-2285o-3 | MI0022296 | 12 | chr24 | 33986931 | 33987011 | + | - |
| bta-mir-2285o-4 | MI0022297 | 14 | chr24 | 41526818 | 41526895 | + | - |
| bta-mir-2285m-3 | MI0022298 | 8 | chr24 | 23966743 | 23966825 | - | - |
| bta-mir-378c | MI0022299 | 749 | chr24 | 31823795 | 31823863 | - | - |
| bta-mir-2284y-4 | MI0022300 | 268 | chr24 | 33986933 | 33987009 | - | - |
| bta-mir-6523a | MI0022301 | 11 | chr24 | 46294907 | 46294988 | - | - |
| bta-mir-6524 | MI0022302 | 60 | chr26 | 31908077 | 31908157 | + | - |
| bta-mir-2284y-5 | MI0022303 | 299 | chr2 | 111514014 | 111514102 | + | - |
| bta-mir-6525 | MI0022304 | 7 | chr4 | 114868041 | 114868125 | - | - |
| bta-mir-2284y-6 | MI0022305 | 298 | chr5 | 552083 | 552156 | + | - |
| bta-mir-2285m-4 | MI0022306 | 36 | chr5 | 111321886 | 111321967 | + | - |
| bta-mir-2285o-5 | MI0022307 | 14 | chr5 | 118691013 | 118691088 | - | - |
| bta-mir-3660 | MI0022308 | 2 | chr7 | 92314258 | 92314337 | - | - |
| bta-mir-2285m-5 | MI0022309 | 4 | chr8 | 13168314 | 13168394 | + | - |
| bta-mir-2285n-5 | MI0022310 | 1 | chr8 | 102786395 | 102786475 | - | - |
| bta-mir-2285n-6 | MI0022311 | 1 | chr14 | 83772102 | 83772181 | + | - |
| bta-mir-6526-1 | MI0022313 | 1 | chrX | 30443003 | 30443081 | + | - |
| bta-mir-6526-2 | MI0022314 | 1 | chrX | 30460604 | 30460682 | + | - |
| bta-mir-503 | MI0022315 | 556 | chrX | 18288067 | 18288149 | - | High |
| bta-mir-2284y-7 | MI0022317 | 294 | chr7 | 60786220 | 60786296 | + | - |
| bta-mir-6526-3 | MI0022318 | 1 | chrX | 28658545 | 28658623 | + | - |
| bta-mir-2285n-7 | MI0022319 | 4 | chrX | 131408848 | 131408927 | + | - |
| bta-mir-2284z-1 | MI0022320 | 77 | chr10 | 9111084 | 9111162 | - | - |
| bta-mir-2284aa-1 | MI0022321 | 50 | chr11 | 89597163 | 89597250 | - | - |
| bta-mir-2285k-2 | MI0022322 | 185 | chr13 | 24000650 | 24000730 | - | - |
| bta-mir-6527 | MI0022323 | 8 | chr13 | 79865937 | 79866031 | - | - |
| bta-mir-6528 | MI0022324 | 3 | chr15 | 74896952 | 74897033 | + | - |
| bta-mir-2284z-3 | MI0022325 | 73 | chr15 | 54504475 | 54504549 | - | - |
| bta-mir-2284aa-2 | MI0022326 | 51 | chr19 | 57637821 | 57637899 | + | - |
| bta-mir-2284aa-3 | MI0022327 | 60 | chr19 | 29174040 | 29174119 | - | - |
| bta-mir-6529a | MI0022328 | 181 | chr1 | 65675397 | 65675475 | - | High |
| bta-mir-2285k-3 | MI0022329 | 184 | chr1 | 81160046 | 81160126 | - | - |
| bta-mir-6530 | MI0022330 | 3 | chr20 | 63230045 | 63230120 | - | - |
| bta-mir-6531 | MI0022331 | 20 | chr23 | 31672917 | 31673000 | - | - |
| bta-mir-2285k-4 | MI0022332 | 63 | chr26 | 29573741 | 29573813 | + | - |
| bta-mir-6532 | MI0022333 | 0 | chr27 | 42494396 | 42494474 | - | - |
| bta-mir-6533 | MI0022334 | 6 | chr28 | 24980703 | 24980779 | - | - |
| bta-mir-6534 | MI0022335 | 5 | chr3 | 14441067 | 14441142 | + | - |
| bta-mir-2284z-4 | MI0022336 | 73 | chr3 | 18902656 | 18902735 | + | - |
| bta-mir-2285k-5 | MI0022337 | 185 | chr3 | 53797582 | 53797662 | - | High |
| bta-mir-2284z-5 | MI0022338 | 74 | chr5 | 43348101 | 43348180 | + | - |
| bta-mir-2284z-6 | MI0022339 | 73 | chr5 | 91517940 | 91518019 | - | - |
| bta-mir-6535 | MI0022340 | 3 | chr7 | 19049950 | 19050022 | - | - |
| bta-mir-2284z-7 | MI0022341 | 71 | chr7 | 97333456 | 97333532 | - | - |
| bta-mir-6536-1 | MI0022342 | 13 | chr9 | 39576511 | 39576591 | + | - |
| bta-mir-2284aa-4 | MI0022343 | 51 | chr9 | 81548061 | 81548141 | + | - |
| bta-mir-6536-2 | MI0022344 | 11 | chr9 | 39576511 | 39576590 | - | - |
| bta-mir-2285q | MI0022345 | 30 | chr20 | 13481349 | 13481431 | - | - |
| bta-mir-2285r | MI0022346 | 11 | chr29 | 29280751 | 29280832 | + | - |
| bta-mir-2285s | MI0022347 | 19 | None | None | - | ||
| bta-mir-2285t | MI0022348 | 522 | chr3 | 7976721 | 7976803 | - | High |
| bta-mir-2285b-2 | MI0022349 | 24 | chr3 | 52757309 | 52757389 | - | - |
| bta-mir-2285v | MI0022350 | 15 | chr10 | 9099299 | 9099379 | - | - |
| bta-mir-2284z-2 | MI0022351 | 87 | chr11 | 21501152 | 21501228 | - | High |