miRBase entry: dsi-mir-991

Stem-loop dsi-mir-991


Accession
MI0011733
Description
Drosophila simulans dsi-mir-991 precursor miRNA
Gene family
MIPF0000957; mir-991


Sequence

ggguauaucaaaaauaucacugcaguuucaggcuuUUCCCAACUACAUCUAUUAAUAUuuauuuuaacgucguaUUAAAGUUGAAGUUUGGAAAAUuuugguuuugcauuugaaaucc
((((...(((((........(((((..(((((.((((((.((((.((.((.(((((((.............))))))))).)).)))).)))))).)))))..)))))))))).))))

Structure
    aua     aauaucac     uu     c      C    A  U  A       uuauu 
gggu   ucaaa        ugcag  ucagg uuUUCC AACU CA CU UUAAUAU     u
||||   |||||        |||||  ||||| |||||| |||| || || |||||||     u
ccua   aguuu        acguu  gguuu AAAAGG UUGA GU GA AAUUaug     a
    --a     --------     uu     U      U    A  U  -       cugca 


Annotation confidence Not enough data
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Genome context
chr2R: 15134391-15134508 [-]
Clustered miRNAs
8 other miRNAs are < 10 kb from dsi-mir-991
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dsi-miR-991-5p

Accession MIMAT0012429
Description Drosophila simulans dsi-miR-991-5p mature miRNA
Sequence 36 - UUCCCAACUACAUCUAUUAAUAU - 58
Evidence experimental
Illumina [1-2]

Mature dsi-miR-991-3p

Accession MIMAT0012430
Description Drosophila simulans dsi-miR-991-3p mature miRNA
Sequence 75 - UUAAAGUUGAAGUUUGGAAAAU - 96
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9

  2. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250