miRBase entry: 24985917

Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines

PubMed ID 24985917
Authors "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
Journal "Genome Res
Volume 24
Pages 1236-1250

There are 165 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
der-mir-310b MI0009024 None scaffold_4845 10617892 10617979 - -
der-mir-311a MI0009028 None scaffold_4845 10616549 10616628 - -
der-mir-311b-1 MI0009060 None scaffold_4845 10616837 10616911 - -
der-mir-311c MI0009062 None scaffold_4845 10618008 10618087 - -
der-mir-311b-2 MI0009065 None scaffold_4845 10618294 10618368 - -
der-mir-312-1 MI0009077 None scaffold_4845 10618162 10618227 - -
der-mir-312-2 MI0009089 None scaffold_4845 10616702 10616770 - -
der-mir-310a MI0009095 None scaffold_4845 10616434 10616521 - -
dse-mir-310 MI0009341 None scaffold_1 14025480 14025568 - -
dse-mir-311 MI0009361 None scaffold_1 14025606 14025689 - -
dse-mir-312 MI0009372 None scaffold_1 14025763 14025828 - -
dse-mir-313 MI0009394 None scaffold_1 14025902 14025967 - -
dsi-mir-310 MI0009406 None chr2R 15132557 15132645 - -
dsi-mir-311 MI0009422 None chr2R 15132682 15132767 - -
dsi-mir-313 MI0009439 None chr2R 15132988 15133053 - -
dsi-mir-312 MI0009440 None chr2R 15132849 15132914 - -
dya-mir-311a MI0009664 None chr2R 12724827 12724906 + -
dya-mir-310 MI0009665 None chr2R 12724935 12725022 + -
dya-mir-312 MI0009683 None chr2R 12724700 12724766 + -
dya-mir-311b MI0009696 None chr2R 12724551 12724629 + -
dsi-mir-977 MI0011729 None chrX 15018634 15018748 + -
dsi-mir-978a MI0011730 None None None -
dsi-mir-991 MI0011733 None chr2R 15134391 15134508 - -
dsi-mir-992 MI0011764 None chr2R 15134519 15134598 - -
dsi-mir-975 MI0011772 None chrX 15018370 15018489 + -
dsi-mir-976 MI0011773 None chrX 15018508 15018600 + -
dsi-mir-978b MI0011774 None None None -
dsi-mir-982c MI0011782 None chrX 3273520 3273624 - -
dsi-mir-982b MI0011783 None chrX 3273921 3274024 - -
dsi-mir-982a MI0011784 None chrX 3274561 3274652 - -
dsi-mir-303 MI0011785 None chrX 3275250 3275335 - -
dsi-mir-2582a MI0011788 None chrX 3274401 3274516 - -
dsi-mir-2582b MI0011790 None chrX 3273790 3273868 - -
dsi-mir-983a MI0011791 None chrX 3277334 3277453 - -
dvi-mir-973 MI0029263 None scaffold_13042 918343 918437 - -
dvi-mir-976 MI0029264 None scaffold_13042 906737 906829 - -
dvi-mir-9539 MI0029278 None scaffold_12855 6284648 6284774 + -
dvi-mir-9540 MI0029279 None scaffold_12855 6284791 6284883 + -
dvi-mir-9542a MI0029280 None scaffold_12970 9418994 9419089 - -
dvi-mir-9543a MI0029281 None scaffold_12970 9427846 9427976 - -
dvi-mir-9544a MI0029282 None scaffold_12970 9428974 9429102 - -
dvi-mir-9545 MI0029283 None scaffold_12970 9429441 9429543 - -
dvi-mir-9547 MI0029285 None scaffold_13042 917881 917955 - -
dvi-mir-974-1 MI0029290 None scaffold_13042 917735 917829 - -
dvi-mir-974-2 MI0029291 None scaffold_13042 917557 917651 - -
dvi-mir-975 MI0029292 None scaffold_13042 906914 907008 - -
dvi-mir-977 MI0029293 None scaffold_13042 906576 906670 - -
dsi-mir-2498a MI0030848 None chr2R 15133881 15133941 - -
dsi-mir-2498c MI0030849 None chr2R 15134038 15134093 - -
dsi-mir-2498b MI0030850 None chr2R 15133515 15133573 - -
dsi-mir-983b MI0030851 None chrX 3277365 3277423 + -
dsi-mir-9680 MI0030853 None None None -
dsi-mir-972 MI0030854 None chrX 15010940 15011042 + -
dsi-mir-973 MI0030855 None chrX 15011304 15011398 + -
dsi-mir-4966-1 MI0030857 None None None -
dsi-mir-4966-2 MI0030858 None None None -
dsi-mir-4966-3 MI0030859 None None None -
dsi-mir-9369 MI0030860 None chrX 15011138 15011198 + -
dsi-mir-974 MI0030861 None chrX 15011455 15011517 + -
dsi-mir-2499 MI0030862 None chrX 15016882 15016940 + -
dse-mir-2498b MI0030863 None scaffold_1 14026439 14026497 - -
dse-mir-2498a MI0030865 None scaffold_1 14026948 14027011 - -
dse-mir-991 MI0030867 None scaffold_1 14027438 14027499 - -
dse-mir-992 MI0030868 None scaffold_1 14027554 14027612 - -
dse-mir-982c-1 MI0030869 None scaffold_4 2465414 2465476 + -
dse-mir-982c-2 MI0030870 None scaffold_4 2466054 2466116 + -
dse-mir-303 MI0030872 None scaffold_4 2464338 2464408 + -
dse-mir-982b-1 MI0030873 None scaffold_4 2465009 2465082 + -
dse-mir-982b-2 MI0030874 None scaffold_4 2465648 2465719 + -
dse-mir-2582-1 MI0030875 None scaffold_4 2465160 2465217 + -
dse-mir-2582-2 MI0030876 None scaffold_4 2465800 2465857 + -
dse-mir-983 MI0030877 None scaffold_4 2462240 2462298 + -
dse-mir-973 MI0030878 None scaffold_8 1727993 1728061 + -
dse-mir-976 MI0030879 None scaffold_8 1735259 1735320 + -
dse-mir-4966-1 MI0030880 None scaffold_8 1734680 1734739 + -
dse-mir-4966-2 MI0030882 None scaffold_8 1734810 1734963 + -
dse-mir-975 MI0030885 None scaffold_8 1735124 1735214 + -
dse-mir-974 MI0030886 None scaffold_8 1728136 1728198 + -
dse-mir-2499 MI0030887 None scaffold_8 1733353 1733412 + -
dse-mir-978a MI0030888 None scaffold_8 1737880 1737942 + -
dse-mir-978b MI0030889 None scaffold_8 1737879 1737938 - -
dse-mir-977 MI0030890 None scaffold_8 1735396 1735459 + -
dse-mir-9680 MI0030891 None scaffold_8 1718473 1718532 + -
dse-mir-9369 MI0030892 None scaffold_8 1727807 1727868 + -
dse-mir-9685 MI0030893 None scaffold_0 15993641 15993696 - -
dya-mir-992 MI0030894 None chr2R 12723683 12723748 + -
dya-mir-2498 MI0030895 None chr2R 12723909 12723977 + -
dya-mir-9681 MI0030897 None chr2R 12724136 12724190 + -
dya-mir-991 MI0030898 None chr2R 12723801 12723862 + -
dya-mir-9682 MI0030900 None chrX 4178218 4178277 + -
dya-mir-303 MI0030903 None chrX 4177759 4177819 + -
dya-mir-9683 MI0030904 None chrX 11901555 11901617 - -
dya-mir-975 MI0030906 None chrX 11885970 11886060 - -
dya-mir-978 MI0030907 None chrX 11883759 11883850 - -
dya-mir-2499 MI0030908 None chrX 11887463 11887525 - -
dya-mir-976 MI0030909 None chrX 11885828 11885885 - -
dya-mir-9690 MI0030910 None chrX 11886162 11886224 - -
dya-mir-977 MI0030911 None chrX 11885659 11885723 - -
der-mir-9681 MI0030912 None scaffold_4845 10618728 10618783 - -
der-mir-991-1 MI0030913 None scaffold_4845 10617587 10617649 - -
der-mir-991-2 MI0030914 None scaffold_4845 10619061 10619123 - -
der-mir-992-1 MI0030915 None scaffold_4845 10619176 10619234 - -
der-mir-2498a MI0030916 None scaffold_4845 10618951 10619010 - -
der-mir-2498b MI0030917 None scaffold_4845 10617479 10617536 - -
der-mir-992-2 MI0030918 None scaffold_4845 10617702 10617760 - -
der-mir-9691 MI0030919 None scaffold_4690 1633026 1633099 - -
der-mir-983a MI0030921 None scaffold_4690 1633140 1633202 - -
der-mir-983b MI0030922 None scaffold_4690 1633142 1633205 + -
der-mir-9682 MI0030923 None scaffold_4690 1630746 1630805 - -
der-mir-2499 MI0030924 None scaffold_4690 9687401 9687461 + -
der-mir-975 MI0030925 None scaffold_4690 9688771 9688861 + -
der-mir-977 MI0030926 None scaffold_4690 9689075 9689177 + -
der-mir-978 MI0030927 None scaffold_4690 9691198 9691289 + -
der-mir-974 MI0030928 None scaffold_4690 9682476 9682538 + -
der-mir-976 MI0030929 None scaffold_4690 9688930 9688987 + -
der-mir-973 MI0030930 None scaffold_4690 9682325 9682395 + -
der-mir-9683 MI0030931 None scaffold_4690 9672360 9672417 + -
der-mir-9680 MI0030932 None scaffold_4690 9673197 9673257 + -
dvi-mir-9692 MI0030933 None scaffold_13042 912386 912483 - -
dvi-mir-9693 MI0030934 None scaffold_13042 907106 907161 - -
dvi-mir-9694 MI0030935 None scaffold_13042 907106 907161 + -
dvi-mir-9695 MI0030936 None scaffold_13042 903358 903445 - -
dvi-mir-9696a MI0030937 None scaffold_13042 903188 903280 - -
dvi-mir-9696b MI0030938 None scaffold_13042 903198 903268 + -
dvi-mir-9697 MI0030939 None scaffold_13042 903020 903103 - -
dvi-mir-9698 MI0030940 None scaffold_13042 902871 902931 - -
dvi-mir-9699 MI0030941 None scaffold_13042 902700 902761 - -
dvi-mir-9538b MI0030943 None scaffold_12855 6282879 6282946 + -
dvi-mir-9700a MI0030944 None scaffold_12855 6284216 6284276 - -
dvi-mir-9700b MI0030945 None scaffold_12855 6284220 6284277 + -
dvi-mir-9701a MI0030946 None scaffold_12855 6284350 6284416 - -
dvi-mir-9701b MI0030947 None scaffold_12855 6284353 6284417 + -
dvi-mir-9702 MI0030948 None scaffold_12855 6286659 6286719 + -
dvi-mir-9703 MI0030949 None scaffold_12855 6286827 6286888 + -
dvi-mir-9704-1 MI0030950 None scaffold_12723 4641314 4641373 - -
dvi-mir-9705-2 MI0030951 None scaffold_12723 4641044 4641104 - -
dvi-mir-9706a-1 MI0030952 None scaffold_12723 4640891 4640948 - -
dvi-mir-9706b-1 MI0030953 None scaffold_12723 4640892 4640954 + -
dvi-mir-9707-1 MI0030954 None scaffold_12723 4640770 4640832 - -
dvi-mir-9704-2 MI0030955 None scaffold_12963 329857 329951 + -
dvi-mir-9705-1 MI0030956 None scaffold_12963 330138 330197 + -
dvi-mir-9707-2 MI0030959 None scaffold_12963 330393 330485 + -
dvi-mir-9708a MI0030960 None scaffold_13042 2033003 2033121 - -
dvi-mir-9708b MI0030961 None scaffold_13042 2032720 2032835 - -
dvi-mir-9708c MI0030962 None scaffold_13042 2032606 2032669 - -
dvi-mir-9708d MI0030963 None scaffold_13042 2032476 2032534 - -
dvi-mir-9544c MI0030964 None scaffold_12970 9429631 9429694 - -
dvi-mir-9544b MI0030965 None scaffold_12970 9429010 9429070 + -
dvi-mir-9709 MI0030966 None scaffold_12970 9428722 9428838 - -
dvi-mir-9541b MI0030967 None scaffold_12970 9428404 9428468 - -
dvi-mir-9541a MI0030968 None scaffold_12970 9428406 9428469 + -
dvi-mir-9710 MI0030969 None scaffold_12970 9428001 9428064 - -
dvi-mir-9711 MI0030971 None scaffold_12970 9427098 9427154 - -
dvi-mir-9712 MI0030972 None scaffold_12970 9426825 9426912 - -
dvi-mir-9713 MI0030973 None scaffold_12970 9426638 9426704 - -
dvi-mir-9714 MI0030974 None scaffold_12970 9426640 9426709 + -
dvi-mir-9542d MI0030975 None scaffold_12970 9419392 9419452 - -
dvi-mir-9542b MI0030977 None scaffold_12970 9418038 9418099 - -
dvi-mir-9542e MI0030978 None scaffold_12970 9417366 9417426 - -
dvi-mir-9542c MI0030979 None scaffold_12970 9416655 9416716 - -
dvi-mir-9716 MI0030980 None scaffold_12855 2693707 2693761 - -
dvi-mir-9717 MI0030981 None scaffold_13047 1194059 1194115 + -
dvi-mir-9719 MI0030984 None scaffold_13042 2032315 2032396 - -
dvi-mir-9720 MI0030985 None scaffold_12970 9426838 9426903 + -
dvi-mir-9721 MI0030986 None scaffold_12970 9419681 9419786 - -



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