miRBase entry: dse-mir-982c-2

Stem-loop dse-mir-982c-2


Accession
MI0030870
Description
Drosophila sechellia dse-mir-982c-2 precursor miRNA


Sequence

UCUUGGACAAAUAUCAAGUAGAuuauuuuuauacaucaauUUAUUGUUAUUUGUCCUUGAACu
((..(((((((((.(((.((((((.............))))))))).)))))))))..))...

Structure
---  UU         U   G      auuuu 
   UC  GGACAAAUA CAA UAGAuu     u
   ||  ||||||||| ||| ||||||     a
   AG  CCUGUUUAU GUU AUUuaa     u
uCA  UU         U   -      cuaca 


Annotation confidence Not enough data
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Genome context
scaffold_4: 2466054-2466116 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from dse-mir-982c-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dse-miR-982c-5p

Accession MIMAT0039132
Description Drosophila sechellia dse-miR-982c-5p mature miRNA
Sequence 1 - UCUUGGACAAAUAUCAAGUAGA - 22
Evidence experimental
Illumina [1]

Mature dse-miR-982c-3p

Accession MIMAT0039133
Description Drosophila sechellia dse-miR-982c-3p mature miRNA
Sequence 41 - UUAUUGUUAUUUGUCCUUGAAC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250