miRBase entry: dvi-mir-9698

Stem-loop dvi-mir-9698


Accession
MI0030940
Description
Drosophila virilis dvi-mir-9698 precursor miRNA


Sequence

GAACUCGAUUCUCCUCUGUCAUaugcggacgauaacuaUGGCAGUGAGGGUGGGGUUUCCu
((((((.((((((..((((((((.............)))))))).)))))).))))))...

Structure
---      G      CU        ugcgg 
   GAACUC AUUCUC  CUGUCAUa     a
   |||||| ||||||  ||||||||     c
   UUUGGG UGGGAG  GACGGUau     g
uCC      G      -U        caaua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_13042: 902871-902931 [-]
Clustered miRNAs
11 other miRNAs are < 10 kb from dvi-mir-9698
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dvi-miR-9698-5p

Accession MIMAT0039238
Description Drosophila virilis dvi-miR-9698-5p mature miRNA
Sequence 1 - GAACUCGAUUCUCCUCUGUCAU - 22
Evidence experimental
Illumina [1]

Mature dvi-miR-9698-3p

Accession MIMAT0039239
Description Drosophila virilis dvi-miR-9698-3p mature miRNA
Sequence 39 - UGGCAGUGAGGGUGGGGUUUCC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250