miRBase entry: dsi-mir-2498b

Stem-loop dsi-mir-2498b

Accession

MI0030850

Description

Drosophila simulans dsi-mir-2498b precursor miRNA

Sequence

AAAAGUCUGUUAUGCUAAUGUUuguguguuuaacaaACUUGGCAUAACCGCUUUUUacu
((((((..((((((((((.((((((.......)))))))))))))))).))))))....

Structure

----      CU          U      gu 
    AAAAGU  GUUAUGCUAA GUUugu  g
    ||||||  |||||||||| ||||||  u
    UUUUCG  CAAUACGGUU CAaaca  u
ucaU      -C          -      au

Annotation confidence Not enough data

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Genome context

chr2R: 15133515-15133573 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from dsi-mir-2498b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dsi-miR-2498b-5p

Accession	MIMAT0039105
Description	Drosophila simulans dsi-miR-2498b-5p mature miRNA
Sequence	1 - AAAAGUCUGUUAUGCUAAUGUU - 22
Evidence	experimental Illumina [1]

Mature dsi-miR-2498b-3p

Accession	MIMAT0039106
Description	Drosophila simulans dsi-miR-2498b-3p mature miRNA
Sequence	37 - ACUUGGCAUAACCGCUUUUU - 56
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250