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miRBase |
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Stem-loop sequence mtr-MIR2111m |
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Accession | MI0011844 (change log) | |||||||||
Description | Medicago truncatula miR2111m stem-loop | |||||||||
Gene family | MIPF0000754; MIR2111 | |||||||||
Literature search |
2 open access papers mention mtr-MIR2111m | |||||||||
Stem-loop |
--uua -- u c u - u 5' auuggu uaagga aggguaaucug auccugagg uuaga gcaaca u |||||| |||||| ||||||||||| ||||||||| ||||| |||||| 3' uaacca auucuu uuucauuagac uagggcucc gaucu uguugu u aagug ua u a u a g |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence mtr-miR2111m-5p |
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Accession | MIMAT0013297 |
Sequence |
21 - uaaucugcauccugagguuua - 41 |
Evidence | experimental; 454 [1], Illumina [2] |
Mature sequence mtr-miR2111m-3p |
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Accession | MIMAT0026928 |
Sequence |
65 - guccucgggauacagauuacu - 85 |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:19767456
"Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules"
Plant Cell. 21:2780-2796(2009).
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2 |
PMID:23572382
"microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula"
Planta. 238:91-105(2013).
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