Stem-loop hsv1-mir-H8

Accession

MI0012168

Description

Herpes Simplex Virus 1 hsv1-mir-H8 precursor miRNA

Sequence

gucccuguaUAUAUAGGGUCAGGGGGUUCcgcacccccuaacauggcGCCCCCGGUCCCUGUAUAUAuaguuguc
....((((((((((((((.(.((((((.(((............))).)))))).).)))))))))))))).....

Structure

-gucc              U A      U   caccc 
     cuguaUAUAUAGGG C GGGGGU Ccg     c
     |||||||||||||| | |||||| |||      
     gauAUAUAUGUCCC G CCCCCG ggu     c
cuguu              U G      c   acaau 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv1-miR-H8-5p

• Accession: MIMAT0012597
• Description: Herpes Simplex Virus 1 hsv1-miR-H8-5p mature miRNA
• Sequence: 10 - UAUAUAGGGUCAGGGGGUUC - 29
• Evidence: experimental ; Illumina [1-2]

Mature hsv1-miR-H8-3p

• Accession: MIMAT0012598
• Description: Herpes Simplex Virus 1 hsv1-miR-H8-3p mature miRNA
• Sequence: 48 - GCCCCCGGUCCCUGUAUAUA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672


2. PubMed ID: 19656888
   Analysis of human alphaherpesvirus microRNA expression in latently infected human trigeminal ganglia
   "Umbach JL, Nagel MA, Cohrs RJ, Gilden DH, Cullen BR"
   "J Virol (2009) 83:10677-10683