miRBase entry: isc-mir-993

Stem-loop isc-mir-993


Accession
MI0012289
Description
Ixodes scapularis isc-mir-993 precursor miRNA
Gene family
MIPF0000033; mir-10

Literature search
1 open access papers mention isc-mir-993
(3 sentences)

Sequence

cacgagcccuucguaaucuacccuguagaaccgggcuuuuguagacuagcgacccuuucaGAAGCUCGUUUCUACAGGUAUCUugcgaaauc
.........(((((((..((((.(((((((.((((((((((.((..........))..)))))))))).)))))))))))..)))))))...

Structure
cacgagccc       uc    c       c          -u  acua 
         uucguaa  uacc uguagaa cgggcuuuug  ag    g
         |||||||  |||| ||||||| ||||||||||  ||     
         aagcguU  AUGG ACAUCUU GCUCGAAGac  uc    c
------cua       CU    -       U          uu  ccag 


Annotation confidence Not enough data
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Genome context
DS891538: 3285820-3285911 [-]

Database links

Mature isc-miR-993

Accession MIMAT0012709
Description Ixodes scapularis isc-miR-993 mature miRNA
Sequence 61 - GAAGCUCGUUUCUACAGGUAUCU - 83
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68