Stem-loop isc-mir-993

Accession

MI0012289

Description

Ixodes scapularis isc-mir-993 precursor miRNA

Literature search

1 open access papers mention isc-mir-993
(3 sentences)

Sequence

cacgagcccuucguaaucuacccuguagaaccgggcuuuuguagacuagcgacccuuucaGAAGCUCGUUUCUACAGGUAUCUugcgaaauc
.........(((((((..((((.(((((((.((((((((((.((..........))..)))))))))).)))))))))))..)))))))...

Structure

cacgagccc       uc    c       c          -u  acua 
         uucguaa  uacc uguagaa cgggcuuuug  ag    g
         |||||||  |||| ||||||| ||||||||||  ||     
         aagcguU  AUGG ACAUCUU GCUCGAAGac  uc    c
------cua       CU    -       U          uu  ccag 

Annotation confidence Not enough data

Genome context

DS891538: 3285820-3285911 [-]

Mature isc-miR-993

• Accession: MIMAT0012709
• Description: Ixodes scapularis isc-miR-993 mature miRNA
• Sequence: 61 - GAAGCUCGUUUCUACAGGUAUCU - 83
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68