miRBase entry: rno-mir-875

Stem-loop rno-mir-875


Accession
MI0012604
Description
Rattus norvegicus rno-mir-875 precursor miRNA
Gene family
MIPF0000424; mir-875

Literature search
1 open access papers mention rno-mir-875
(1 sentences)

Sequence

24 reads, 2 reads per million, 19 experiments
ucugugguacUAUACCUCAGUUUUAUCAGGUGuucauucaaaucaccugaaaacacugaggcugcgucccacu
...((((.((....(((((((.((.(((((((...........))))))).)).)))))))....)).)))).

Structure
ucu    u  UAUA       U  A       uuca 
   gugg ac    CCUCAGU UU UCAGGUG    u
   |||| ||    ||||||| || |||||||    u
   cacc ug    ggaguca aa aguccac    c
--u    c  cguc       c  a       uaaa 


Annotation confidence Not enough data
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Genome context
chr7: 74423233-74423305 [-]

Database links

Mature rno-miR-875

Accession MIMAT0012842
Description Rattus norvegicus rno-miR-875 mature miRNA
Sequence 11 - UAUACCUCAGUUUUAUCAGGUG - 32
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39