Stem-loop osa-MIR2880

Accession

MI0013046

Description

Oryza sativa osa-MIR2880 precursor miRNA

Sequence

59 reads, 46 reads per million, 2 experiments

augcuacaggACGGUAUCCCGUUCGGACAGGAUGauaccucagagguaucgucugauacccagguaugccaauaccuaguagguauuggcgauaccuugagguaucaucauguccaaacgggguaucagccgauaccuuagaugaucaucccgucugaacgggaaaccgucccguagcau
(((((((.(((((((.((((((((((((.(((((((.(.((.(((((((((.(((((((((..((..((((((((((...))))))))))((((((....))))))...........)).))))))))).))))))))).)).)))))))).)))))))))))).))))))).)))))))

Structure

       a       A            A       a c  a         u         ag  -------------------------au          a 
augcuac ggACGGU UCCCGUUCGGAC GGAUGau c uc gagguaucg cugauaccc  gu                           gccaauaccu  
||||||| ||||||| |||||||||||| ||||||| | || ||||||||| |||||||||  ||                           |||||||||| g
uacgaug ccugcca agggcaagucug ccuacua g ag uuccauagc gacuauggg  ca                           cgguuaugga  
       c       a            c       - u  a         c         -g  aaccuguacuacuauggaguuccauag          u 

Annotation confidence Not enough data

Genome context

Chr3: 22741618-22741797 [+]

Mature osa-miR2880

• Accession: MIMAT0013832
• Description: Oryza sativa osa-miR2880 mature miRNA
• Sequence: 11 - ACGGUAUCCCGUUCGGACAGGAUG - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19903869
   Rice MicroRNA effector complexes and targets
   "Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y"
   "Plant Cell (2009) 21:3421-3435