Stem-loop cqu-mir-283

Accession

MI0013580

Description

Culex quinquefasciatus cqu-mir-283 precursor miRNA

Gene family

MIPF0000054; mir-216

Sequence

cagauuuguucggcugaaagguCAAUAUCAGCUGGUAAUUCUGGGcuuuccaaacccguugucgcuucccgggauuccaacugauauccacuuuuuagucgaaaugguca
..((((..((((((((((((((..(((((((.(((.(((((((((.....(((.....)))......)))))))))))).)))))))..))))))))))))))..)))).

Structure

ca    ug              CA       C   U         -cuuuc   a 
  gauu  uucggcugaaaggu  AUAUCAG UGG AAUUCUGGG      caa c
  ||||  ||||||||||||||  ||||||| ||| |||||||||      ||| c
  cugg  aagcugauuuuuca  uauaguc acc uuagggccc      guu c
-a    ua              cc       a   -         uucgcu   g 

Annotation confidence Not enough data

Genome context

supercont3.57: 559440-559549 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cqu-mir-283

Mature cqu-miR-283

• Accession: MIMAT0014379
• Description: Culex quinquefasciatus cqu-miR-283 mature miRNA
• Sequence: 23 - CAAUAUCAGCUGGUAAUUCUGGG - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119