miRBase entry: 20167119

Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus

PubMed ID 20167119
Authors Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
Journal BMC Genomics
Volume 11
Pages 119

There are 221 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
aae-mir-184 MI0013433 86688 supercont1.496 143366 143453 - -
aae-mir-275 MI0013434 35700 supercont1.24 486536 486618 + High
aae-mir-277 MI0013435 956 supercont1.265 508799 508893 + High
aae-mir-9c MI0013436 287 None None -
aae-mir-8 MI0013437 10753 supercont1.411 876043 876121 + High
aae-mir-252 MI0013438 2550 supercont1.56 1580021 1580091 - High
aae-bantam MI0013439 2493 supercont1.49 1579552 1579622 - High
aae-mir-71 MI0013440 8198 supercont1.268 889378 889454 - High
aae-mir-276-1 MI0013441 35626 supercont1.134 38970 39060 + High
aae-mir-317-1 MI0013442 18155 supercont1.153 2154700 2154791 - -
aae-mir-2a MI0013443 1891 supercont1.268 888581 888677 - High
aae-mir-998 MI0013444 691 supercont1.744 322280 322371 + -
aae-mir-92a MI0013445 625 supercont1.116 1267202 1267283 + High
aae-mir-306 MI0013446 110 supercont1.785 213059 213187 + High
aae-mir-281 MI0013447 1377 supercont1.957 134442 134538 + High
aae-mir-1889 MI0013448 141 supercont1.68 2720794 2720921 - High
aae-mir-980 MI0013449 74 supercont1.23 1043020 1043095 + High
aae-mir-278 MI0013450 124 supercont1.16 3596261 3596341 + High
aae-mir-989 MI0013451 10 supercont1.115 804160 804274 - -
aae-mir-14 MI0013452 1619 supercont1.249 1088962 1089134 - -
aae-mir-11 MI0013453 1495 supercont1.744 321996 322109 + High
aae-mir-190 MI0013454 4120 supercont1.195 82191 82291 - -
aae-mir-1 MI0013455 530586 supercont1.812 291326 291401 + -
aae-mir-34 MI0013456 45559 supercont1.265 509521 509649 + High
aae-mir-1890 MI0013457 167 supercont1.204 1733300 1733385 + -
aae-mir-957 MI0013458 2818 supercont1.7 464288 464365 + -
aae-mir-305 MI0013459 1831 supercont1.24 495587 495674 + High
aae-mir-996 MI0013460 6016 supercont1.437 567493 567590 - -
aae-mir-87 MI0013461 137 supercont1.360 1010781 1010887 + -
aae-mir-12 MI0013462 1123 supercont1.68 2720396 2720497 - High
aae-mir-13 MI0013463 756 supercont1.268 888736 888819 - High
aae-mir-999 MI0013464 1413 supercont1.100 2315100 2315178 + High
aae-mir-125 MI0013465 3408 supercont1.43 1156595 1156689 + -
aae-mir-308 MI0013466 730 supercont1.107 508970 509045 + High
aae-mir-315 MI0013467 1105 supercont1.612 104128 104219 + High
aae-mir-1891-1 MI0013468 1417 supercont1.199 1109700 1109786 - -
aae-mir-1891-2 MI0013469 1417 supercont1.466 72785 72876 + -
aae-mir-1175 MI0013470 4 supercont1.125 1648025 1648108 + -
aae-mir-1174 MI0013471 0 supercont1.125 1647825 1647942 + -
aae-mir-993 MI0013472 863 supercont1.1056 256781 256881 + -
aae-mir-981 MI0013473 998 supercont1.127 638368 638458 - -
aae-mir-965 MI0013474 29 supercont1.51 2008650 2008728 + -
aae-mir-932 MI0013475 4908 supercont1.1064 154098 154192 - High
aae-mir-927 MI0013476 1440 supercont1.26 2065412 2065487 + -
aae-mir-309a-1 MI0013477 0 supercont1.150 907874 907965 + -
aae-mir-309a-2 MI0013478 0 supercont1.602 94025 94115 + -
aae-mir-285 MI0013479 6085 supercont1.23 3339127 3339230 - -
aae-mir-137-1 MI0013480 586 supercont1.1191 97782 97885 + -
aae-mir-137-2 MI0013481 586 supercont1.137 260667 260769 - -
aae-mir-133 MI0013482 179 supercont1.778 350289 350407 - -
aae-mir-31 MI0013483 1792 supercont1.636 483181 483329 - -
aae-mir-10 MI0013484 2248 supercont1.440 813543 813631 + -
aae-mir-iab-4-1 MI0013485 7 supercont1.423 763483 763556 - -
aae-mir-283 MI0013486 217 supercont1.68 2729329 2729431 - -
aae-mir-988 MI0013487 49 supercont1.442 623050 623124 - High
aae-mir-124 MI0013488 14774 supercont1.6 1664615 1664690 - -
aae-mir-2940 MI0013489 4022 supercont1.222 643957 644065 + High
aae-mir-2765 MI0013490 87 supercont1.1 5248294 5248380 + -
aae-mir-2941-1 MI0013491 2 supercont1.385 413127 413232 - -
aae-mir-2941-2 MI0013492 1 supercont1.385 413436 413530 - -
aae-mir-33 MI0013493 477 supercont1.487 351648 351727 + High
aae-mir-279 MI0013494 1911 supercont1.437 572245 572339 - -
aae-mir-263a MI0013495 10485 supercont1.981 164938 165034 - High
aae-mir-7 MI0013496 3173 supercont1.1359 46026 46114 + -
aae-mir-100 MI0013497 2715 supercont1.43 1142154 1142279 + -
aae-mir-970 MI0013498 7915 supercont1.229 1045811 1045918 + -
aae-mir-210 MI0013499 6560 supercont1.512 515644 515711 - -
aae-mir-79 MI0013500 336 supercont1.785 213262 213357 + High
aae-mir-307 MI0013501 68 supercont1.16 1859419 1859509 - -
aae-mir-1000-1 MI0013502 294 supercont1.187 325456 325552 + -
aae-mir-1000-2 MI0013503 294 supercont1.3798 170 266 - -
aae-mir-375 MI0013504 2 supercont1.309 1318735 1318850 - -
aae-mir-iab-4-2 MI0013531 7 supercont1.708 50256 50329 + -
cqu-mir-1174 MI0013561 None supercont3.86 865899 865962 + -
cqu-mir-125 MI0013562 None supercont3.4 280955 281049 + -
cqu-mir-iab-4 MI0013563 None supercont3.12 681147 681234 + -
cqu-mir-281-1 MI0013564 None supercont3.1661 13232 13338 + -
cqu-mir-124 MI0013565 None supercont3.8 2074723 2074800 + -
cqu-mir-1 MI0013566 None supercont3.78 246202 246278 + -
cqu-mir-988 MI0013567 None supercont3.791 14278 14363 + -
cqu-mir-275 MI0013568 None supercont3.291 329754 329854 + -
cqu-mir-315 MI0013569 None supercont3.438 61910 62002 + -
cqu-let-7 MI0013570 None supercont3.4 280595 280685 + -
cqu-mir-13 MI0013571 None supercont3.366 116988 117069 - -
cqu-mir-957 MI0013572 None supercont3.787 29533 29627 + -
cqu-mir-999 MI0013573 None supercont3.14 96862 96952 + -
cqu-mir-277 MI0013574 None supercont3.36 1153723 1153818 + -
cqu-mir-965 MI0013575 None supercont3.48 484120 484211 + -
cqu-mir-252-1 MI0013576 None supercont3.1787 6797 6867 - -
cqu-mir-993 MI0013577 None supercont3.12 55470 55568 + -
cqu-mir-278 MI0013578 None supercont3.16 1026146 1026250 + -
cqu-mir-970 MI0013579 None supercont3.495 35917 36003 + -
cqu-mir-283 MI0013580 None supercont3.57 559440 559549 + -
cqu-mir-9 MI0013581 None supercont3.83 64711 64821 + -
cqu-mir-305 MI0013582 None supercont3.291 339120 339207 + -
cqu-mir-317-1 MI0013583 None supercont3.36 1133155 1133246 + -
cqu-mir-981 MI0013584 None supercont3.431 151310 151408 + -
cqu-mir-100 MI0013585 None supercont3.4 271392 271501 + -
cqu-mir-989 MI0013586 None supercont3.315 321300 321401 + -
cqu-mir-1175 MI0013587 None supercont3.86 866094 866196 + -
cqu-mir-276-1 MI0013588 None supercont3.136 340846 340955 + -
cqu-mir-276-2 MI0013589 None supercont3.136 541130 541236 + -
cqu-mir-276-3 MI0013590 None supercont3.2457 865 974 + -
cqu-mir-12 MI0013591 None supercont3.57 562944 563041 + -
cqu-mir-210 MI0013592 None supercont3.549 157655 157722 - -
cqu-mir-263 MI0013593 None supercont3.219 351803 351878 - -
cqu-mir-92 MI0013594 None supercont3.722 174899 174986 - -
cqu-mir-71 MI0013596 None supercont3.366 117497 117578 - -
cqu-mir-190-2 MI0013597 None supercont3.351 105046 105135 - -
cqu-mir-190-1 MI0013598 None supercont3.181 347901 347990 - -
cqu-mir-1000 MI0013599 None supercont3.153 102798 102891 - -
cqu-mir-10 MI0013600 None supercont3.12 95988 96073 - -
cqu-mir-11 MI0013601 None supercont3.153 639666 639741 - -
cqu-mir-8 MI0013602 None supercont3.40 815858 815934 - -
cqu-mir-285 MI0013603 None supercont3.98 262290 262356 - -
cqu-mir-2 MI0013604 None supercont3.366 116852 116935 - -
cqu-mir-137 MI0013605 None supercont3.1714 27549 27639 - -
cqu-mir-932 MI0013606 None supercont3.261 301410 301474 - -
cqu-mir-14 MI0013607 None supercont3.676 52228 52328 - -
cqu-mir-279 MI0013608 None supercont3.19 1441120 1441192 - -
cqu-mir-996 MI0013609 None supercont3.19 1436999 1437091 - -
cqu-bantam MI0013610 None supercont3.65 199694 199763 - -
cqu-mir-1891 MI0013611 None supercont3.829 180333 180418 - -
cqu-mir-7 MI0013612 None supercont3.1 3357339 3357427 - -
cqu-mir-184 MI0013613 None supercont3.567 240300 240384 - -
cqu-mir-31 MI0013614 None supercont3.559 256524 256610 - -
cqu-mir-1890 MI0013615 None supercont3.64 982780 982856 - -
cqu-mir-980 MI0013617 None supercont3.263 352873 352948 + -
cqu-mir-308 MI0013618 None supercont3.98 764130 764200 + -
cqu-mir-79 MI0013619 None supercont3.83 80583 80657 + -
cqu-mir-33 MI0013620 None supercont3.1258 69328 69403 - -
cqu-mir-2951 MI0013621 None supercont3.1464 4408 4477 + -
cqu-mir-2941-1 MI0013622 None supercont3.5 753640 753706 - -
cqu-mir-2941-2 MI0013623 None supercont3.5 753788 753868 - -
cqu-mir-2952 MI0013624 None supercont3.5 753920 753983 - -
cqu-mir-133 MI0013625 None supercont3.1189 55672 55785 + -
cqu-mir-306 MI0013626 None supercont3.83 80431 80502 + -
cqu-mir-87 MI0013627 None supercont3.431 379740 379823 + -
cqu-mir-1889 MI0013628 None supercont3.57 562539 562677 + -
cqu-mir-316 MI0013629 None supercont3.496 152426 152564 - -
cqu-mir-375-1 MI0013630 None supercont3.4 25117 25222 - -
cqu-mir-309 MI0013631 None supercont3.145 66026 66116 - -
cqu-mir-998 MI0013632 None supercont3.153 639506 639609 - -
cqu-mir-252-2 MI0023546 None supercont3.975 115583 115653 + -
cqu-mir-281-2 MI0023547 None supercont3.640 99719 99825 + -
cqu-mir-317-2 MI0023548 None supercont3.36 1134821 1134912 + -
cqu-mir-375-2 MI0023549 None supercont3.455 42516 42621 + -
hsa-mir-33a MI0000091 793 chr22 41900944 41901012 + High
hsa-mir-92a-1 MI0000093 7474 chr13 91351314 91351391 + High
hsa-mir-92a-2 MI0000094 7101 chrX 134169538 134169612 - High
dme-mir-1 MI0000116 107366 chr2L 20487441 20487531 + High
dme-mir-8 MI0000128 57465 chr2R 16831432 16831518 + High
dme-mir-11 MI0000131 14078 chr3R 21622497 21622571 - High
hsa-mir-34a MI0000268 442 chr1 9151668 9151777 - High
hsa-mir-210 MI0000286 423 chr11 568089 568198 - High
dme-mir-184 MI0000354 120037 chr2R 13329402 13329501 - High
dme-mir-275 MI0000356 3405 chr2L 7425795 7425892 + High
dme-mir-92a MI0000357 7392 chr3R 25646506 25646600 + High
dme-mir-276a MI0000359 51649 chr3L 10365228 10365325 + High
dme-mir-277 MI0000360 22508 chr3R 10100022 10100121 + High
dme-mir-33 MI0000364 5938 chr3L 19797961 19798059 + High
dme-mir-281-1 MI0000366 2379 chr2R 12170373 12170462 - High
dme-mir-281-2 MI0000370 12674 chr2R 12170153 12170244 - High
dme-mir-34 MI0000371 32763 chr3R 10100936 10101034 + High
dme-mir-276b MI0000375 14614 chr3L 10319785 10319883 + High
dme-mir-210 MI0000376 2903 chrX 18128219 18128318 + High
dme-mir-92b MI0000379 7352 chr3R 25651398 25651497 + High
dme-bantam MI0000387 54356 chr3L 642208 642288 + High
dme-mir-309 MI0000421 2231 chr2R 19661706 19661774 - High
dme-mir-317 MI0000429 10951 chr3R 10091126 10091217 + High
hsa-mir-1-2 MI0000437 5211 chr18 21829004 21829088 - High
hsa-mir-184 MI0000481 1603 chr15 79209788 79209871 + -
hsa-mir-190a MI0000486 127 chr15 62823957 62824041 + High
hsa-mir-1-1 MI0000651 5442 chr20 62554306 62554376 + High
hsa-mir-34b MI0000742 437 chr11 111512938 111513021 + High
hsa-mir-34c MI0000743 1301 chr11 111513439 111513515 + High
aga-bantam MI0001599 None chr2R 33274498 33274608 + -
aga-mir-1 MI0001601 None chr3R 10569154 10569251 - -
aga-mir-184 MI0001609 None chr3R 42632357 42632438 + -
aga-mir-210 MI0001610 None chrX 21450335 21450414 + -
aga-mir-275 MI0001613 None chr3R 38377342 38377436 + -
aga-mir-276 MI0001614 None chr2L 18991754 18991845 + -
aga-mir-277 MI0001615 None chr2R 28234523 28234612 - -
aga-mir-281 MI0001618 None chr2L 17362421 17362522 - -
aga-mir-317 MI0001627 None chr2R 28251997 28252086 - -
aga-mir-8 MI0001630 None chr3L 38943045 38943130 + -
aga-mir-92a MI0001632 None chr2R 39181115 39181203 + -
aga-mir-92b MI0001633 None chr2R 39200608 39200694 + -
hsa-mir-92b MI0003560 954 chr1 155195177 155195272 + High
hsa-mir-33b MI0003646 221 chr17 17813836 17813931 - High
hsa-mir-190b MI0005545 65 chr1 154193665 154193743 - -
dme-mir-190 MI0005808 1478 chr3L 8571799 8571898 + High
dme-mir-957 MI0005811 3995 chr3L 22518196 22518291 - High
dme-mir-970 MI0005827 1258 chrX 12636336 12636430 + High
dme-mir-980 MI0005837 640 chrX 280172 280269 - High
dme-mir-981 MI0005838 1912 chrX 1788861 1788957 - High
dme-mir-927 MI0005843 583 chrX 15965947 15966038 - High
dme-mir-989 MI0005848 15511 chr2R 14145351 14145524 - High
dme-mir-252 MI0005858 7388 chr3R 13464219 13464311 - High
dme-mir-1000 MI0005862 727 chr3R 25588859 25588958 - High
aga-mir-1174 MI0006237 None chr2R 9129499 9129675 + -
aga-mir-1175 MI0006238 None chr2R 9129786 9129865 + -
aga-mir-34 MI0006239 None chr2R 28232667 28232756 - -
aga-mir-989 MI0006242 None chr3L 2905395 2905525 + -
aga-mir-11 MI0008306 None chr2R 13042022 13042111 + -
aga-mir-981 MI0008307 None chrX 1228287 1228381 + -
aga-mir-1889 MI0008309 None chr2R 37888789 37888919 - -
aga-mir-1890 MI0008311 None chr3R 21181082 21181177 - -
aga-mir-1891 MI0008312 None chr3R 5819038 5819138 - -
aga-mir-190 MI0010594 None chr2L 46755772 46755872 - -
aga-mir-927 MI0010596 None chrX 18737368 18737460 + -
aga-mir-970 MI0010599 None chrX 112022 112119 - -
aga-mir-957 MI0010600 None chr3L 14911228 14911321 + -
aga-mir-1000 MI0010604 None chr2R 13241765 13241857 + -
aga-mir-309 MI0010607 None chr3R 43008711 43008784 - -
aga-mir-2944a-1 MI0033336 None chr3R 43008879 43008934 - -
aga-mir-2944a-2 MI0033337 None chr2L 3537080 3537136 - -
aga-mir-2944b MI0033339 None chr3R 43009067 43009127 - -
aga-mir-2945 MI0033348 None chr3R 10314332 10314397 - -
aga-mir-33 MI0033352 None chrX 1256014 1256078 - -
aga-mir-980 MI0033361 None chr2R 21985899 21985956 - -



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