Stem-loop cqu-mir-276-1

Accession

MI0013588

Description

Culex quinquefasciatus cqu-mir-276-1 precursor miRNA

Gene family

MIPF0000124; mir-276

Literature search

1 open access papers mention cqu-mir-276-1
(3 sentences)

Sequence

gaguuugaaaguucacccgcuAGCGAGGUAUAGAGUUCCUaugcguugauuggauucgcuauccaUAGGAACUUCAUACCGUGCUCUuggauggcuuuccguucaucaga
(((...((((((.((.(((..((((.(((((.(((((((((((.(((((......)))..)).))))))))))).))))).))))..))).))))))))..)))......

Structure

------   uuu      u  c   cu    A     A           c  --   uu 
      gag   gaaagu ca ccg  AGCG GGUAU GAGUUCCUaug gu  uga  g
      |||   |||||| || |||  |||| ||||| ||||||||||| ||  |||   
      cuu   cuuucg gu ggu  UCGU CCAUA UUCAAGGAUac ua  gcu  g
agacua   -gc      -  a   UC    G     C           c  uc   ua 

Annotation confidence Not enough data

Genome context

supercont3.136: 340846-340955 [+]

Mature cqu-miR-276-5p

• Accession: MIMAT0014392
• Description: Culex quinquefasciatus cqu-miR-276-5p mature miRNA
• Sequence: 22 - AGCGAGGUAUAGAGUUCCU - 40
• Evidence: experimental ; Illumina [1]

Mature cqu-miR-276-3p

• Accession: MIMAT0014393
• Description: Culex quinquefasciatus cqu-miR-276-3p mature miRNA
• Sequence: 66 - UAGGAACUUCAUACCGUGCUCU - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119