Stem-loop sequence cqu-mir-33

Accession

MI0013620 (change log)

Description

Culex quinquefasciatus miR-33 stem-loop

Gene family

MIPF0000070; mir-33

Literature search

2 open access papers mention cqu-mir-33
(6 sentences)

Stem-loop

   ------  -g          -----        c  g     c 
5'       gg  ugcauuguag     uugcauug ac uuuug g
         ||  ||||||||||     |||||||| || |||||  
3'       cc  acguaacguc     gacgugac ug aaagc u
   ggugga  aa          uucau        c  a     u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CpipJ1): supercont3.1258: 69328-69403 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0013620

Mature sequence cqu-miR-33

• Accession: MIMAT0014431
• Sequence: 3 - gugcauuguaguugcauugca - 23
• Evidence: experimental; Illumina [1]

References

1. PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).