Stem-loop sequence cqu-mir-998

AccessionMI0013632 (change log)
DescriptionCulex quinquefasciatus miR-998 stem-loop
Gene family MIPF0000952; mir-998
Stem-loop
   aca  -uguu     auu    ga     c        gu     -  g  uu 
5'    ga     ggcca   ccgg  cugaa ucucgugg  cugca gu cu  u
      ||     |||||   ||||  ||||| ||||||||  ||||| || ||  c
3'    cu     cuggu   ggcc  gacuu agaguacc  gaugu ca gg  g
   --g  uuguu     cgu    uc     -        ac     u  a  uu 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (CpipJ1) Overlapping transcripts
supercont3.153: 639506-639609 [-]
intergenic
Clustered miRNAs
< 10kb from cqu-mir-998
cqu-mir-11supercont3.153: 639666-639741 [-]
cqu-mir-998supercont3.153: 639506-639609 [-]
Database links

Mature sequence cqu-miR-998

Accession MIMAT0014445
Sequence

65 - 

uagcaccaugagauucagc

 - 83

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Evidence experimental; Illumina [1]

References

1
PMID:20167119 "Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus" Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR BMC Genomics. 11:119(2010).