Stem-loop tgu-mir-2985-2

Accession

MI0013684

Description

Taeniopygia guttata tgu-mir-2985-2 precursor miRNA

Gene family

MIPF0001067; mir-2985

Literature search

1 open access papers mention tgu-mir-2985-2
(1 sentences)

Sequence

aggguucuccauuaagGUGGGUGGAAUAGUAUAACAAUauaaaauguguuguuauaguauuccaccuucccugaugucccu
((((.....(((((.((.((((((((((.((((((((((((...)))))))))))).)))))))))).)).))))).))))

Structure

    uucuc     a  U          G            a 
aggg     cauua gG GGGUGGAAUA UAUAACAAUaua  
||||     ||||| || |||||||||| |||||||||||| a
uccc     guagu cc uccaccuuau auauuguugugu  
    ----u     c  u          g            a 

Annotation confidence Not enough data

Genome context

chr1: 75574420-75574500 [-]

Mature tgu-miR-2985

• Accession: MIMAT0014495
• Description: Taeniopygia guttata tgu-miR-2985 mature miRNA
• Sequence: 17 - GUGGGUGGAAUAGUAUAACAAU - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762