Stem-loop tgu-mir-2992

Accession

MI0013765

Description

Taeniopygia guttata tgu-mir-2992 precursor miRNA

Literature search

1 open access papers mention tgu-mir-2992
(1 sentences)

Sequence

ggcggcagggCCCCGGCAGGACAAAGUCUCUcuguggagggcugcucagagccggcuuuguccugccgggc
...........(((((((((((((((((.(((((.(........).)))))..))))))))))))))))).

Structure

ggcggcagggC                 -U     u gag 
           CCCGGCAGGACAAAGUC  CUcug g   g
           |||||||||||||||||  ||||| |    
           gggccguccuguuucgg  gagac c   g
----------c                 cc     u guc 

Annotation confidence Not enough data

Genome context

chrZ: 57612703-57612773 [+]

Mature tgu-miR-2992

• Accession: MIMAT0014549
• Description: Taeniopygia guttata tgu-miR-2992 mature miRNA
• Sequence: 11 - CCCCGGCAGGACAAAGUCUCU - 31
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727