Stem-loop hsv1-mir-H17

Accession

MI0013891

Description

Herpes Simplex Virus 1 hsv1-mir-H17 precursor miRNA

Sequence

ggcccacucgcacgccgccugcgcgcgcuggggccugggcgcgccgcugcggcccguguacgUGGCGCUGGGGCGCGAGGCGGugcgcgccggcc
((((....(((.((((((((.(((((.((((.((((((((.(((....)))))))).......))).)))).))))))))))))).)))..))))

Structure

    cacu   a        g     g    g   -------     g   c 
ggcc    cgc cgccgccu cgcgc cugg gcc       ugggc cgc g
||||    ||| |||||||| ||||| |||| |||       ||||| |||  
ccgg    gcg guGGCGGA GCGCG GGUC CGG       gcccg gcg c
    --cc   c        -     G    G   Ugcaugu     -   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv1-miR-H17

• Accession: MIMAT0014695
• Description: Herpes Simplex Virus 1 hsv1-miR-H17 mature miRNA
• Sequence: 63 - UGGCGCUGGGGCGCGAGGCGG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20181707
   Numerous conserved and divergent microRNAs expressed by herpes simplex viruses 1 and 2
   "Jurak I, Kramer MF, Mellor JC, van Lint AL, Roth FP, Knipe DM, Coen DM"
   "J Virol (2010) 84:4659-4672