Stem-loop api-mir-965

Accession

MI0013948

Description

Acyrthosiphon pisum api-mir-965 precursor miRNA

Gene family

MIPF0000708; mir-965

Literature search

1 open access papers mention api-mir-965
(1 sentences)

Sequence

gaggaaaaguuauaacgguuauguucauaauaacagucgUAAGCGUAUAGCUUUUCCCCUU
..((((((((((((.((.(((((..............))))).))))))))))))))....

Structure

--ga            a  g     uucaua 
    ggaaaaguuaua cg uuaug      a
    |||||||||||| || |||||       
    CCUUUUCGAUAU GC AAUgc      u
UUCC            -  G     ugacaa 

Annotation confidence Not enough data

Genome context

GL351142.1: 47370-47430 [-]

Mature api-miR-965

• Accession: MIMAT0014744
• Description: Acyrthosiphon pisum api-miR-965 mature miRNA
• Sequence: 40 - UAAGCGUAUAGCUUUUCCCCUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281