Stem-loop hsa-mir-3160-2

Accession

MI0014190

Symbol

HGNC: MIR3160-2

Description

Homo sapiens hsa-mir-3160-2 precursor miRNA mir-3160

Gene
family

RF03888; mir-3160

Literature search

1 open access papers mention hsa-mir-3160-2
(2 sentences)

Sequence

104 reads, 3 reads per million, 40 experiments

accugcccugGGCUUUCUAGUCUCAGCUCUCCugaccagcugagcuggaggAGAGCUGAGACUAGAAAGCCCAgggcaggu
(((((((((((((((((((((((((((((((((..(((((...))))))))))))))))))))))))))))))))))))))

Structure

                                 ga     u 
accugcccugGGCUUUCUAGUCUCAGCUCUCCu  ccagc  
|||||||||||||||||||||||||||||||||  ||||| g
uggacgggACCCGAAAGAUCAGAGUCGAGAgga  ggucg  
                                 --     a 

Annotation confidence Low

Genome context

chr11: 46451807-46451887 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-3160-2

Disease association

hsa-mir-3160-2 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-3160-3p

• Accession: MIMAT0015034
• Description: Homo sapiens hsa-miR-3160-3p mature miRNA
• Sequence: 52 - AGAGCUGAGACUAGAAAGCCCA - 73
• Evidence: experimental ; Illumina [1-2]

Mature hsa-miR-3160-5p

• Accession: MIMAT0019212
• Description: Homo sapiens hsa-miR-3160-5p mature miRNA
• Sequence: 11 - GGCUUUCUAGUCUCAGCUCUCC - 32
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86