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miRBase |
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Stem-loop sequence bta-mir-2284w |
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Accession | MI0014497 (change log) | ||||
Description | Bos taurus miR-2284w stem-loop | ||||
Gene family | MIPF0000747; mir-2284 | ||||
Literature search |
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14 open access papers mention bta-mir-2284w | ||||
Stem-loop |
uuu -u - ug c c c a 5' caa uauuggguuggccaa gaguu uu ggguuu uc aua g ||| ||||||||||||||| ||||| || |||||| || ||| c 3' guu auaacccaaccgguu cucaa aa uccaaa ag uau u -uc uu u gu c a a g |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
Jin et al. predicted this miRNA bioinformatically in [1], and validated its expression by qPCR in [2]. |
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Genome context |
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Database links |
Mature sequence bta-miR-2284w |
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Accession | MIMAT0017393 |
Sequence |
21 - aagaguuuguucggguuucuc - 41 |
Deep sequencing | 1034 reads, 64 experiments |
Evidence | experimental; qPCR [2], Illumina [3] |
Predicted targets |
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References |
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1 |
PMID:19758457
"Characterization of bovine miRNAs by sequencing and bioinformatics analysis"
BMC Mol Biol. 10:90(2009).
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2 | |
3 |
PMID:21912509
"Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle"
Int J Biol Sci. 7:1016-1026(2011).
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