Stem-loop ppy-let-7d

Accession

MI0014784

Description

Pongo pygmaeus ppy-let-7d precursor miRNA

Literature search

2 open access papers mention ppy-let-7d
(4 sentences)

Sequence

ccuaggaAGAGGUAGUAGGUUGCAUAGUUuuagggcagggauuuugcccacaaggagguaacuauacgaccugcugccuuucuuagg
(((((((.((((((((((((((.((((((...((((((.....))))))..........)))))).)))))))))))))))))))))

Structure

       A              C      -------uua      g 
ccuagga GAGGUAGUAGGUUG AUAGUU          gggcag g
||||||| |||||||||||||| ||||||          |||||| a
ggauucu uuccgucguccagc uaucaa          cccguu u
       -              a      uggaggaaca      u 

Annotation confidence Low

Genome context

chr9: 89897633-89897719 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ppy-let-7d

Mature ppy-let-7d

• Accession: MIMAT0015724
• Description: Pongo pygmaeus ppy-let-7d mature miRNA
• Sequence: 8 - AGAGGUAGUAGGUUGCAUAGUU - 29
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64