Stem-loop sequence ppy-mir-655

AccessionMI0015130 (change log)
DescriptionPongo pygmaeus miR-655 stem-loop
Gene family MIPF0000018; mir-154
Stem-loop 
   aacuauucaag      ug           u      ua      cuuca 
5'            gauauu  aggagagguua ccgugu  uguucg     u
              ||||||  ||||||||||| ||||||  ||||||      
3'            cuauaa  uuuucuccaau gguaca  auaagu     u
   -----cucaga      gu           u      ua      acuac
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (P_pygmaeus_2.0.2; GCF_000001545.4) Overlapping transcripts
chr14: 102611698-102611794 [+]
intergenic
Clustered miRNAs
< 10kb from ppy-mir-655
ppy-mir-376cchr14: 102601818-102601883 [+]
ppy-mir-376a-2chr14: 102602202-102602281 [+]
ppy-mir-654chr14: 102602352-102602432 [+]
ppy-mir-376bchr14: 102602569-102602668 [+]
ppy-mir-376a-1chr14: 102602915-102602982 [+]
ppy-mir-300chr14: 102603492-102603574 [+]
ppy-mir-1185-1chr14: 102605109-102605194 [+]
ppy-mir-1185-2chr14: 102606330-102606415 [+]
ppy-mir-381chr14: 102608058-102608132 [+]
ppy-mir-487bchr14: 102608591-102608674 [+]
ppy-mir-539chr14: 102609453-102609530 [+]
ppy-mir-889chr14: 102610033-102610111 [+]
ppy-mir-544chr14: 102610806-102610896 [+]
ppy-mir-655chr14: 102611698-102611794 [+]
ppy-mir-487achr14: 102614611-102614690 [+]
ppy-mir-382chr14: 102616490-102616565 [+]
ppy-mir-134chr14: 102616871-102616943 [+]
ppy-mir-668chr14: 102617958-102618024 [+]
ppy-mir-485chr14: 102618120-102618192 [+]
ppy-mir-453chr14: 102618891-102618970 [+]
Database links

Mature sequence ppy-miR-655

Accession MIMAT0016089
Sequence

61 -  

auaauacaugguuaaccucuuu

 - 82

Get sequence
Evidence not experimental

References

1
PMID:20214803 "Genome-wide comparative analysis of microRNAs in three non-human primates" Brameier M BMC Res Notes. 3:64(2010).