Stem-loop sequence tca-mir-252a

Accession MI0016350
Description Tribolium castaneum miR-252a stem-loop
Gene family MIPF0000285; mir-252
Stem-loop 
aaaga    -      ac        a u  c       ua a 
     cugu ccuguu  uaaguacu g gc gcaggag  c u
     |||| ||||||  |||||||| | || |||||||  |  
     gaca ggguaa  auucguga c cg cguccuc  g u
aguaa    c      cu        a u  u       ca c
Get sequence
Deep sequencing
29446 reads, 2 experiments
Genome context
Coordinates (Tcas3.0) Overlapping transcripts
chrLG9: 10101246-10101332 [+]
intergenic
Clustered miRNAs
< 10kb from tca-mir-252a
tca-mir-252b chrLG9: 10093331-10093424 [+]
tca-mir-252a chrLG9: 10101246-10101332 [+]
Database links

Mature sequence tca-miR-252a-5p

Accession MIMAT0018804
Sequence

17 -  

cuaaguacuagugccgcagg

 - 36

Get sequence
Deep sequencing 28356 reads, 2 experiments
Evidence experimental; SOLID [1]

Mature sequence tca-miR-252a-3p

Accession MIMAT0018805
Sequence

51 -  

ccugcugcucaagugcuuauc

 - 71

Get sequence
Deep sequencing 1090 reads, 2 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).