Stem-loop pma-mir-1a

Accession

MI0016999

Description

Petromyzon marinus pma-mir-1a precursor miRNA

Gene family

MIPF0000038; mir-1

Sequence

uucggcugaggcaAUGUGCCUCUUUACGUCCCCAUacgcagcucugagucuaUGGAAUGUAAAGAAGUACGUUGcuucugcggag
.((.((.((((((((((((.(((((((((..(((((.((........)).))))).))))))))).)))))))))))).)).)).

Structure

u  g  u            C         CC     c  agc 
 uc gc gaggcaAUGUGC UCUUUACGU  CCAUa gc   u
 || || |||||||||||| |||||||||  ||||| ||    
 ag cg cuucGUUGCAUG AGAAAUGUA  GGUau ug   c
g  g  u            A         -A     c  agu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-1a-5p

• Accession: MIMAT0019364
• Description: Petromyzon marinus pma-miR-1a-5p mature miRNA
• Sequence: 14 - AUGUGCCUCUUUACGUCCCCAU - 35
• Evidence: experimental ; 454 [1]

Mature pma-miR-1a-3p

• Accession: MIMAT0019365
• Description: Petromyzon marinus pma-miR-1a-3p mature miRNA
• Sequence: 53 - UGGAAUGUAAAGAAGUACGUUG - 74
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383