Stem-loop pma-mir-1c

Accession

MI0017001

Description

Petromyzon marinus pma-mir-1c precursor miRNA

Gene family

MIPF0000038; mir-1

Sequence

ucacccugccaagggcaCGUACUUAUUUGUAUUGCCAUAcgaaugagcuguagcuaUGGAAUGUAAAGAAGUAUGUACccugggcagggcuc
...(((((((.((((.((((((((.((((((((.((((((............).))))))))))))).)))))))).)))).)))))))...

Structure

uca       a    c        A        G     - gaaug 
   cccugcc aggg aCGUACUU UUUGUAUU CCAUA c     a
   ||||||| |||| |||||||| |||||||| ||||| |      
   gggacgg uccC UGUAUGAA AAAUGUAA GGUau g     g
cuc       g    A        G        -     c auguc 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-1c-5p

• Accession: MIMAT0019367
• Description: Petromyzon marinus pma-miR-1c-5p mature miRNA
• Sequence: 18 - CGUACUUAUUUGUAUUGCCAUA - 39
• Evidence: experimental ; 454 [1]

Mature pma-miR-1c-3p

• Accession: MIMAT0019368
• Description: Petromyzon marinus pma-miR-1c-3p mature miRNA
• Sequence: 57 - UGGAAUGUAAAGAAGUAUGUAC - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383