Stem-loop pma-mir-7a-1

Accession

MI0017003

Description

Petromyzon marinus pma-mir-7a-1 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

ggucuugcggccgggUGGAAGACUAGUGAUUUUGUUGUuucgaucuagaaaccaacagcaagucacagucucccguccggcucagauc
(((((...((((((((((.(((((.((((((((((((((((......)))).)))))..)))))))))))).)))))))))).)))))

Structure

     ugc          A     A       --     -    ga 
ggucu   ggccgggUGG AGACU GUGAUUU  UGUUG Uuuc  u
|||||   |||||||||| ||||| |||||||  ||||| ||||   
cuaga   ucggccugcc ucuga cacugaa  acaac aaag  c
     --c          c     -       cg     c    au 

Annotation confidence Not enough data

Genome context

GL480045.1: 16544-16631 [+]

Mature pma-miR-7a-5p

• Accession: MIMAT0019370
• Description: Petromyzon marinus pma-miR-7a-5p mature miRNA
• Sequence: 16 - UGGAAGACUAGUGAUUUUGUUGU - 38
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383