Stem-loop pma-mir-22a

Accession

MI0017024

Description

Petromyzon marinus pma-mir-22a precursor miRNA

Gene family

MIPF0000053; mir-22

Sequence

cccuggccgccccacugcAGCCCUUCGCUGGCCAGCUUUAGuuccggccgaggcgaguaAAGCUGCCAGUUGAAGAGCUAUagugggcggccacgc
...(((((((((.((((.(((.((((((((((.(((((((.((((......)).)).)))))))))))).))))).))).)))))))))))))...

Structure

ccc         c    c   C     -     C       G  -  gg 
   uggccgccc acug AGC CUUCG CUGGC AGCUUUA uu cc  c
   ||||||||| |||| ||| ||||| ||||| ||||||| || ||   
   accggcggg ugaU UCG GAAGU GACCG UCGAAau ag gg  c
cgc         -    A   A     U     -       g  c  ag 

Annotation confidence Not enough data

Genome context

GL477321.1: 44900-44995 [+]

Mature pma-miR-22a-5p

• Accession: MIMAT0019398
• Description: Petromyzon marinus pma-miR-22a-5p mature miRNA
• Sequence: 19 - AGCCCUUCGCUGGCCAGCUUUAG - 41
• Evidence: experimental ; 454 [1]

Mature pma-miR-22a-3p

• Accession: MIMAT0019399
• Description: Petromyzon marinus pma-miR-22a-3p mature miRNA
• Sequence: 60 - AAGCUGCCAGUUGAAGAGCUAU - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383