Stem-loop pma-mir-26a-1

Accession

MI0017030

Description

Petromyzon marinus pma-mir-26a-1 precursor miRNA

Gene family

MIPF0000043; mir-26

Sequence

ggaugcagccuggUUCAAGUAAUCCAGGAUAGGCUggcgucucagaccccgcggCCUGUCCUUGCUUACUUGGACCaggagguaguc
...(((..((((((((((((((.(.((((((((((((.(((...))).))..)))))))))).).))))))))))))))..)))...

Structure

gga   ag              U C          --  c   u 
   ugc  ccuggUUCAAGUAA C AGGAUAGGCU  gg guc  
   |||  |||||||||||||| | ||||||||||  || ||| c
   aug  ggaCCAGGUUCAUU G UCCUGUCCgg  cc cag  
cug   ga              C U          cg  c   a 

Annotation confidence Not enough data

Genome context

GL482776.1: 5474-5560 [+]

Mature pma-miR-26a-5p

• Accession: MIMAT0019408
• Description: Petromyzon marinus pma-miR-26a-5p mature miRNA
• Sequence: 14 - UUCAAGUAAUCCAGGAUAGGCU - 35
• Evidence: experimental ; 454 [1]

Mature pma-miR-26a-1-3p

• Accession: MIMAT0019409
• Description: Petromyzon marinus pma-miR-26a-1-3p mature miRNA
• Sequence: 55 - CCUGUCCUUGCUUACUUGGACC - 76
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383