Stem-loop pma-mir-30f-2

Accession

MI0017045

Description

Petromyzon marinus pma-mir-30f-2 precursor miRNA

Gene family

MIPF0000005; mir-30

Sequence

cugcaggcagUGUAAACACCCUACACUCUCAGCugcugacugacagaggaagcugggagagggugcuuaccuugccuggcu
...(((((((.((((.((((((...(((((((((.((..((...)).)).))))))))))))))).)))).)))))))...

Structure

cug       U    A      ACA         g  ga  g 
   caggcag GUAA CACCCU   CUCUCAGCu cu  cu  
   ||||||| |||| ||||||   ||||||||| ||  || a
   guccguu cauu guggga   gagggucga gg  ga  
ucg       c    c      ---         a  -a  c 

Annotation confidence Not enough data

Genome context

GL476359.1: 493312-493392 [-]

Mature pma-miR-30f

• Accession: MIMAT0019430
• Description: Petromyzon marinus pma-miR-30f mature miRNA
• Sequence: 11 - UGUAAACACCCUACACUCUCAGC - 33
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383