Stem-loop pma-mir-33b

Accession

MI0017049

Description

Petromyzon marinus pma-mir-33b precursor miRNA

Gene family

MIPF0000070; mir-33

Sequence

ccgcuaugCUGCAUUGUUGUUGCAUUGCAUccugcagugccuugugggugcgauguaguaacagugcugcacagaga
.(.((.(((.((((((((((((((((((((((.((((....)))))))))))))))))))))))))).))).)).).

Structure

c g  a   U                      u    u 
 c cu ugC GCAUUGUUGUUGCAUUGCAUcc gcag g
 | || ||| |||||||||||||||||||||| ||||  
 g ga acg cgugacaaugauguagcguggg uguu c
a a  c   u                      -    c 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-33b

• Accession: MIMAT0019434
• Description: Petromyzon marinus pma-miR-33b mature miRNA
• Sequence: 9 - CUGCAUUGUUGUUGCAUUGCAU - 30
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383