Stem-loop pma-mir-130d

Accession

MI0017063

Description

Petromyzon marinus pma-mir-130d precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

ggacgacccgaugcccuuucaacgucgcaccgcugugagcagagcgagCAGUGCAAUGUUGAAAAAGGGCAUcgguucgguu
...(((.((((((((((((((((((.((((.(((((.......)).))).)))).)))))))..))))))))))).)))...

Structure

gga   c           --       c    c   -  ga 
   cga ccgaugcccuu  ucaacgu gcac gcu gu  g
   ||| |||||||||||  ||||||| |||| ||| ||  c
   gcu ggcUACGGGAA  AGUUGUA CGUG Cga cg  a
uug   u           AA       A    A   g  ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-130d

• Accession: MIMAT0019452
• Description: Petromyzon marinus pma-miR-130d mature miRNA
• Sequence: 49 - CAGUGCAAUGUUGAAAAAGGGCAU - 72
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383