Stem-loop pma-mir-130b

Accession

MI0017066

Description

Petromyzon marinus pma-mir-130b precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

augugguggaaaacuccuuuuuauauugugcuacuguguccucugcgaagUAGUGCAAUGUGAAAAGGGCAUuggggagucgcgccuuuc
....((((((...((((((((((((((((((((((.(((.....))).))))))))))))))))))))......))...)).))))....

Structure

augu    -  aaa  ------                    g   c 
    ggug ga   cu      ccuuuuuauauugugcuacu ugu c
    |||| ||   ||      |||||||||||||||||||| ||| u
    ccgc cu   gg      GGAAAAGUGUAACGUGAUga gcg c
cuuu    g  gag  guUACG                    a   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-130b

• Accession: MIMAT0019456
• Description: Petromyzon marinus pma-miR-130b mature miRNA
• Sequence: 51 - UAGUGCAAUGUGAAAAGGGCAU - 72
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383