Stem-loop pma-mir-138a

Accession

MI0017075

Description

Petromyzon marinus pma-mir-138a precursor miRNA

Gene family

MIPF0000075; mir-138

Sequence

ccggcggcAGCUGGUGUUGUGAAUCAGGCCGguggcgcagccccuagacacacggcuguuucacuacagcagggucgcau
...(((((..(((.(((.(((((.(((.((((((..............))).)))))).))))).))).))).)))))..

Structure

ccg     AG   G   U     U   G   -   gcgcag 
   gcggc  CUG UGU GUGAA CAG CCG gug      c
   |||||  ||| ||| ||||| ||| ||| |||       
   cgcug  gac aca cacuu guc ggc cac      c
-ua     -g   g   u     u   -   a   agaucc 

Annotation confidence Not enough data

Genome context

GL479709.1: 187234-187313 [+]

Mature pma-miR-138a

• Accession: MIMAT0019469
• Description: Petromyzon marinus pma-miR-138a mature miRNA
• Sequence: 9 - AGCUGGUGUUGUGAAUCAGGCCG - 31
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383