Stem-loop pma-mir-143

Accession

MI0017078

Description

Petromyzon marinus pma-mir-143 precursor miRNA

Gene family

MIPF0000094; mir-143

Sequence

uacccgggGGUGCAGUGCUUUACCUCUGGuuggguugagagucUGAGAUGAAGCACUGUAACUCCggaug
...((((((..(((((((((((.(((.((((........)))).))).)))))))))))..))))))...

Structure

uac      GU           C   U    ggg 
   ccgggG  GCAGUGCUUUA CUC GGuu   u
   ||||||  ||||||||||| ||| ||||    
   ggCCUC  UGUCACGAAGU GAG cuga   u
gua      AA           A   U    gag 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-143-5p

• Accession: MIMAT0019472
• Description: Petromyzon marinus pma-miR-143-5p mature miRNA
• Sequence: 9 - GGUGCAGUGCUUUACCUCUGG - 29
• Evidence: experimental ; 454 [1]

Mature pma-miR-143-3p

• Accession: MIMAT0019473
• Description: Petromyzon marinus pma-miR-143-3p mature miRNA
• Sequence: 44 - UGAGAUGAAGCACUGUAACUCC - 65
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383