Stem-loop pma-mir-153-2

Accession

MI0017086

Description

Petromyzon marinus pma-mir-153-2 precursor miRNA

Gene family

MIPF0000050; mir-153

Sequence

cggcugaugucauuuuugugauuugcaacucguuuuacgugugaagUUGCAUAGUCACAAAAGUGAUCAUcagagg
...((((((((((((((((((((((((((((((...))).....))))))).)))))))))))))).))))))...

Structure

cgg      -              -       -----   u 
   cugaug ucauuuuugugauu ugcaacu     cgu  
   |||||| |||||||||||||| |||||||     ||| u
   gacUAC AGUGAAAACACUGA ACGUUga     gca  
gga      U              U       agugu   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pma-miR-153-3p

• Accession: MIMAT0019484
• Description: Petromyzon marinus pma-miR-153-3p mature miRNA
• Sequence: 47 - UUGCAUAGUCACAAAAGUGAUCAU - 70
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383