Stem-loop pma-mir-301a

Accession

MI0017121

Description

Petromyzon marinus pma-mir-301a precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

aacuugcaagccccugcuggaggcucugacaccauugcacuacuguacgcaauggugagCAGUGCAAUUGUAUUGUCAAAGCUuccgucggugagccca
.....((..(((...((.(((((((.(((((.(((((((((.((.(((......))))).))))))).))...))))).))))))))).)))..))...

Structure

aacuu  aa   ccu  u       c     --c  -       a  g   gc 
     gc  gcc   gc ggaggcu ugaca   ca uugcacu cu uac  a
     ||  |||   || ||||||| |||||   || ||||||| || |||   
     cg  ugg   ug ccuUCGA ACUGU   GU AACGUGA ga gug  a
--acc  ag   --c  -       A     UAU  U       C  -   gu 

Annotation confidence Not enough data

Genome context

GL478599.1: 33331-33429 [-]

Mature pma-miR-301a

• Accession: MIMAT0019536
• Description: Petromyzon marinus pma-miR-301a mature miRNA
• Sequence: 60 - CAGUGCAAUUGUAUUGUCAAAGCU - 83
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383