Stem-loop pma-mir-4550

Accession

MI0017160

Description

Petromyzon marinus pma-mir-4550 precursor miRNA

Sequence

gccguuguugcucgacucgucgagcagguuucgggugguuacuugccuucauuaaucaugGAAACCGUCCGAAACUUGCUCGacgucaaguaaccacacc
...((.((((((.(((..((((((((((((((((((((((.((................)).))))))))))))))))))))))))).)))))).))...

Structure

gcc  u      c   uc                      a  ugccuuc 
   gu guugcu gac  gucgagcagguuucgggugguu cu       a
   || |||||| |||  |||||||||||||||||||||| ||        
   ca caauga cug  caGCUCGUUCAAAGCCUGCCAA Gg       u
cca  c      a   --                      A  uacuaau 

Annotation confidence Not enough data

Genome context

GL479849.1: 132341-132440 [+]

Mature pma-miR-4550

• Accession: MIMAT0019582
• Description: Petromyzon marinus pma-miR-4550 mature miRNA
• Sequence: 61 - GAAACCGUCCGAAACUUGCUCG - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383