Stem-loop pma-mir-4580

Accession

MI0017190

Description

Petromyzon marinus pma-mir-4580 precursor miRNA

Sequence

gcgugcccgugcaugcccgugcgcgcguccccuggcgugguguucccaCAUCCGCGCGUCGCCUGGGCAGGuggcucga
.((.(((...((.((((((.((((((((.....((.((((.....))))..))))))).))).)))))).))))).)).

Structure

g  u   cgu  a      u   -     ccccu  -c    u 
 cg gcc   gc ugcccg gcg cgcgu     gg  gugg g
 || |||   || |||||| ||| |||||     ||  |||| u
 gc cgg   uG ACGGGU CGC GCGCG     CC  Cacc u
a  u   ---  G      C   U     -----  UA    c 

Annotation confidence Not enough data

Genome context

GL477282.1: 79322-79400 [-]

Mature pma-miR-4580

• Accession: MIMAT0019613
• Description: Petromyzon marinus pma-miR-4580 mature miRNA
• Sequence: 49 - CAUCCGCGCGUCGCCUGGGCAGG - 71
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383