Stem-loop bfl-mir-4857

Accession

MI0017610

Description

Branchiostoma floridae bfl-mir-4857 precursor miRNA

Gene family

MIPF0001842; mir-4857

Sequence

ccguggucACGAUGUUUUUGUCUGCUCCAGAggugaguuauuacgacuuugggacagacgaaacaucucagaccaacg
.(((((((..((((((((.(((((.(((((((((((....))))..))))))).)))))))))))))...)))).)))

Structure

c   -    -AC        U     C       --    g 
 cgu gguc   GAUGUUUU GUCUG UCCAGAg  guga u
 ||| ||||   |||||||| ||||| |||||||  ||||  
 gca ccag   cuacaaag cagac ggguuuc  cauu u
-   a    acu        -     a       ag    a 

Annotation confidence Not enough data

Genome context

GG666534.1: 217921-217998 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from bfl-mir-4857

Mature bfl-miR-4857

• Accession: MIMAT0020083
• Description: Branchiostoma floridae bfl-miR-4857 mature miRNA
• Sequence: 9 - ACGAUGUUUUUGUCUGCUCCAGA - 31
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27