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miRBase |
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Stem-loop sequence bdi-MIR395j |
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Accession | MI0018224 (change log) | |||||||||||||||||||||||
Description | Brachypodium distachyon miR395j stem-loop | |||||||||||||||||||||||
Gene family | MIPF0000016; MIR395 | |||||||||||||||||||||||
Literature search |
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3 open access papers mention bdi-MIR395j | |||||||||||||||||||||||
Stem-loop |
auuc u g -a g u 5' ggu uca gaguuuccc caagcacuucacg ggcc uu u ||| ||| ||||||||| ||||||||||||| |||| || 3' cca ggu cucaagggg guuugugaagugu ucgg ag c cucu u - ca g u |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence bdi-miR395j-5p |
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Accession | MIMAT0027093 |
Sequence |
14 - guuucccgcaagcacuucacg - 34 |
Evidence | experimental; Illumina [2] |
Mature sequence bdi-miR395j-3p |
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Accession | MIMAT0020749 |
Sequence |
58 - ugaaguguuugggggaacuc - 77 |
Evidence | experimental; Illumina [1-2] |
References |
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1 |
PMID:19772667
"Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response"
BMC Genomics. 10:449(2009).
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2 |
PMID:23264558
"Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon"
Mol Plant. 6:423-443(2013).
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