Stem-loop sequence mtr-MIR5204

Accession MI0018239
Description Medicago truncatula miR5204 stem-loop
Gene family MIPF0001295; MIR862_2
Stem-loop 
aacuuu   u     cu     g              ucaua 
      uca guucc  caaag cuuccaguauucgg     u
      ||| |||||  ||||| ||||||||||||||      
      agu caagg  guuuu gaaggucguaaguu     a
uucgau   u     au     g              cauua
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Genome context
Coordinates (Mt3.0) Overlapping transcripts
MtChr7: 20898035-20898120 [+]
intergenic
Clustered miRNAs
< 10kb from mtr-MIR5204
mtr-MIR5206b MtChr7: 20890210-20890330 [-]
mtr-MIR5037c MtChr7: 20892286-20892404 [-]
mtr-MIR5204 MtChr7: 20898035-20898120 [+]

Mature sequence mtr-miR5204

Accession MIMAT0021132
Sequence

56 -  

gcuggaagguuuuguaggaac

 - 76

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Evidence experimental; Solexa [1]

References

1
PMID:21571671 "Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis" Devers EA, Branscheid A, May P, Krajinski F Plant Physiol. 156:1990-2010(2011).